Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201
5-12-17] 164,030 sequences; 282,526,854 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5945 187 3e-42
>seq5945
Length=4136
Score = 187 bits (206), Expect = 3e-42
Identities = 484/729 (66%), Gaps = 24/729 (3%)
Strand=Plus/Minus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
|||||| | ||| | || | || ||||||||| |||||||| ||| | || ||||||
Sbjct 2378 TGGAAGTCGATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 2319
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|||||||||| |||||||| ||||| ||| | || || || || | |||||||||
Sbjct 2318 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2259
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|| || || | | ||||| | ||||| ||| || ||||| | || || ||
Sbjct 2258 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 2199
Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117
|| ||| | || ||| |||| | | || ||| ||| | ||||| | | |||
Sbjct 2198 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 2145
Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176
|||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| ||
Sbjct 2144 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 2085
Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234
||| || || || |||||| |||| |||||||||||| | |||||||| ||
Sbjct 2084 CCTGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 2028
Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293
| || |||| ||| | ||| || || | | || || |||| | |
Sbjct 2027 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 1969
Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
||| | || |||||||| || ||| | | | | || || ||||||||||| ||
Sbjct 1968 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 1909
Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413
|||| ||||| | || |||| | | || ||| || |||||| | || ||
Sbjct 1908 TGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 1849
Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470
|| ||||||||||| || | || | || | ||||||| ||| || || ||
Sbjct 1848 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 1792
Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528
| || ||| | | ||| | || || ||| ||||| || || ||||| || |||
Sbjct 1791 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 1734
Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
|| || |||||||| | || || | ||||| |||||||| | ||| |||| || |||
Sbjct 1733 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 1674
Query 76589 CTGAGAAGA 76597
| ||||||
Sbjct 1673 CAAAGAAGA 1665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595346408606400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |