Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq20122 170 3e-37 seq22953 163 5e-35 seq19342 131 3e-25 seq5480 84.2 4e-11 >seq20122 Length=23100 Score = 170 bits (188), Expect = 3e-37 Identities = 180/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| |||||||| | ||| || |||| || || ||| || Sbjct 10394 AATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTT 10453 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | ||||||||| || ||||| | |||||||| Sbjct 10454 GTAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTG 10513 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || || || |||||||| ||||| | ||| | |||| ||| || || || Sbjct 10514 GTCTGGAGGAATCCCCTCCTTATCTTGAATTTTTGCTTTAACATTTTCAATTGTGTCAGA 10573 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||||||| ||||| ||||||||||| || || ||||||||||| |||||||| Sbjct 10574 AGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTACAAAAATTTGCAT 10630 Score = 163 bits (180), Expect = 5e-35 Identities = 179/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||||| |||||||| | ||| || |||| || || |||||| Sbjct 11306 AATTTGCATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATATT 11365 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || | ||| || | || ||||| |||||||| | || ||||| Sbjct 11366 GTAGTCAGACAGTGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTG 11425 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| |||||||| |||||||| ||||||| || | |||| ||| || || || Sbjct 11426 GTCTGGAGGAATTCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCAGA 11485 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||||||||| || || ||||| || || || || ||||||||||||||||||||| Sbjct 11486 GGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTTTTTACAAATATTTGCATT 11543 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | || | || | |||||| |||| ||| || ||||| Sbjct 10850 AATTTGCATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATT 10909 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || || || | | ||| || | ||| ||||| || ||||| | ||| ||||| Sbjct 10910 ATAGTCTGACAATGTGCGACCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTG 10969 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || ||||| || ||||| ||||| | ||| | |||| || ||||| || Sbjct 10970 ATCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCTATTGTATCAGA 11029 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| | ||| |||||||| || || || || |||||||| ||||||||| Sbjct 11030 AGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 11087 Score = 149 bits (164), Expect = 1e-30 Identities = 178/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 193119 TAAGTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAA 193178 |||| | |||| | ||||||||| | || || || || || | |||| ||||| Sbjct 10161 TAAGAACTTTACACACCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGG 10220 Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||||||||| || || || | ||| || | ||| |||||||||||||| | ||| Sbjct 10221 ATATTATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCAAAAATCAGTCTT 10280 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| ||||| || ||||| || ||||| || || | || | |||| |||||| Sbjct 10281 TGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATAGTA 10340 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| || ||||| | ||| |||||||| || || | ||||| ||||| |||||| Sbjct 10341 TCAGAAGCTTCTACTTCCAAAGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGC 10400 Query 193359 AT 193360 || Sbjct 10401 AT 10402 Score = 145 bits (160), Expect = 1e-29 Identities = 175/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | || || || | ||||| |||| || || |||||| Sbjct 10622 AATTTGCATCCCACCTCTTAGACGCAGAACTAAGTGCAAAGTAGATTCCTTTTGAATATT 10681 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| |||| ||||| || |||||||| | |||||||| Sbjct 10682 ATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAAATCAGCCTCTGTTG 10741 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || || |||||||| || ||||| | || | |||| ||| ||||| || Sbjct 10742 GTCTGGAGGAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGA 10801 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| | ||| |||||||| || || || || |||||||| ||||||||| Sbjct 10802 AGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 10859 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | || | || | |||||| |||| ||| || ||||| Sbjct 11078 AATTTGCATTCCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATT 11137 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || || || | ||| || | ||| ||||| || ||||| | ||| ||||| Sbjct 11138 ATAGTCTGACAATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTG 11197 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || |||||||| || || || || | || | |||| || || || || Sbjct 11198 ATCAGGAGGAATGCCTTCTTTGTCCTGAATCTTTGCCTTAACATTTTCGATTGTGTCAGA 11257 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||| || |||||||| || || || ||||| ||||| |||||||| Sbjct 11258 AGCTTCCACTTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 193158 TGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGT 193217 ||||| |||| || || ||||||||||| || | || | ||| || | ||| Sbjct 11796 TGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAGTTGC 11855 Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277 |||||||| ||||| | ||| |||||||| ||||| || ||||| || ||||| || || Sbjct 11856 TTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTT 11915 Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337 | |||| ||| || ||||| |||| || ||||| | || |||||||| || ||| Sbjct 11916 GCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTTCCCAGTT 11975 Query 193338 AGCGTTTTTACAAATATTTGCAT 193360 | |||||||| || |||||||| Sbjct 11976 AAAGTTTTTACGAAGATTTGCAT 11998 >seq22953 Length=36863 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||||| || | |||| ||||| ||||||||||||||| | || | || || Sbjct 14244 TACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAAAGAGTGCGTCCGTCTTC 14303 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 |||||| ||||| || ||||| || | |||||||| ||||| || ||||| || ||||| Sbjct 14304 TAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTG 14363 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 ||||||| ||||| |||| |||||||||||||| |||||||| | ||| || ||||| Sbjct 14364 AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 14423 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||| || || ||||| ||||| || |||||||| Sbjct 14424 ACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 14456 Score = 147 bits (162), Expect = 4e-30 Identities = 174/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||||| || || ||||| | ||| | |||| |||||| || || Sbjct 13534 ATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTTG 13593 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | | ||| |||| ||||| || ||||| || | | |||||| Sbjct 13594 TAGTCAGACAGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTGA 13653 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||||||||| || || | |||| |||| ||| || || || Sbjct 13654 TCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGAT 13713 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| ||||| ||||||||||| || |||||||| || || |||||||||||||| Sbjct 13714 GGCTCCACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||| | || ||||||| || | || | |||||| ||||| ||||| Sbjct 13084 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCA 13143 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | ||| || || || || || | | |||||||| ||| Sbjct 13144 GACAGGGTGCGCCCATCTTCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 13203 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| |||||||| || |||| ||| | |||| ||| || || || | |||| Sbjct 13204 GGAATTCCTTCCTTATCTTGAATCTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 13263 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| | |||||| ||||| || || || ||||| ||||||||||||||| Sbjct 13264 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 13314 Score = 122 bits (134), Expect = 2e-22 Identities = 169/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| || | | || | ||| | ||| | |||| || || ||||||| Sbjct 13990 ATTTGCATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTA 14049 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || ||||| || | ||| || | ||||||||| |||||||| | ||||||||| Sbjct 14050 TAATCAGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGA 14109 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || ||||| ||||| || || | || | |||| ||||| ||||| Sbjct 14110 TCTGGGGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGAC 14169 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || || |||| ||| || ||||| ||||| || || || ||||| || |||||| Sbjct 14170 GGTTCTACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 14226 Score = 114 bits (126), Expect = 2e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | ||||| || | |||| || | |||||| |||||| Sbjct 13306 ATTTGCATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTG 13365 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || || || | | || || ||||||||||| |||||||| | | |||||| Sbjct 13366 TAATCAGACAAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGG 13425 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || ||||| |||||||| | ||| | ||| ||| || || || Sbjct 13426 TCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCAATTGTGTCAGAT 13485 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || || || || || || || | ||||| |||||||||||||| Sbjct 13486 GGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 13541 >seq19342 Length=14378 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193132 TACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGG 193191 |||| || | | |||||| || ||||||||||| | || || ||| || ||||| | Sbjct 4038 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 4097 Query 193192 ATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAG 193251 | || || | ||| |||| |||||| || ||||| || || | || || || || | Sbjct 4098 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 4157 Query 193252 GTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAA 193311 | || ||||| |||||||| ||||| | ||||| |||| |||||||| || | ||| | Sbjct 4158 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCAGAGGCCTCCA 4217 Query 193312 CTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || || || || |||||||| || || || || || || ||||||||| Sbjct 4218 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 4267 >seq5480 Length=8439 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/100 (81%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 263799 GGTCCGTAGCTACTATGTAAGCCGGTGCTGACGAGGAACCGGTCTAACTCCTTGTCATCA 263858 |||||||||||||| || | |||||| || | ||| |||| ||| ||| || || || Sbjct 4663 GGTCCGTAGCTACTGAGTGAACCGGTGATGGCAGGGAGCCGGCCTACTTCCCTGCCAACA 4722 Query 263859 GATATGTTGAAGCG-TAT-AAGCAATCATATAATGGTAAT 263896 |||||||||||||| ||| |||||||||||| ||||||| Sbjct 4723 GATATGTTGAAGCGTTATAAAGCAATCATAT-GTGGTAAT 4761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897809771109600