Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq308 167 7e-36 seq5945 134 4e-26 seq19418 125 2e-23 >seq308 Length=10929 Score = 167 bits (184), Expect = 7e-36 Identities = 340/497 (68%), Gaps = 10/497 (2%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||||||||| ||||||| | ||| || |||||| || || ||||||| || || Sbjct 690 CCTATCAAATCTACCAGGTCTTAATAAGGCCTTGTCTAAAATGTCCACTCTGTTAGTAGC 631 Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||| |||| | || | | ||| || || |||||||| || || ||| Sbjct 630 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 573 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 ||||| || | ||| ||| || ||||| || | | | || ||| ||||| Sbjct 572 TTAAGAGTATTTTCTTGTTCTGAATG---ACCTCCAAAA-CTTCTGCCTC-CTC-TTTTT 519 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||| ||||| ||||| || | | ||| |||| || || | || ||| Sbjct 518 CTACCAACAGCATCTATTTCATCAATAAATAATATACAGGGAGCATGTTTCCGTGCCATT 459 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 | || | || || || | || | |||| ||||||| ||||||||| ||| || ||| Sbjct 458 GAGAACATATCCCTGACCCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 399 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | |||||| ||| || | ||||| || || || ||| ||| | || ||||| || Sbjct 398 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 339 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 ||||| |||||||| ||||| ||||| ||||||| || | ||| || || | Sbjct 338 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCCTAAATCA 279 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 |||||| || |||| |||| || || | |||| |||| || |||| ||| || || Sbjct 278 ATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTCC 219 Query 289327 TCACATCCTGCTACATC 289343 ||||| || || ||||| Sbjct 218 TCACAACCAGCAACATC 202 >seq5945 Length=4136 Score = 134 bits (148), Expect = 4e-26 Identities = 574/894 (64%), Gaps = 26/894 (3%) Strand=Plus/Plus Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531 || |||||||| |||||||||| || ||||||||| || || ||| ||| || | Sbjct 2089 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 2145 Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591 ||| |||||| | | | |||| | |||| ||| |||||||| ||| | || Sbjct 2146 TCTTTTAATTTTTTAAAATTAAATCTGTTATTTTCA---ACAAACATGTTAAGTGCTATG 2202 Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651 || || || || || || || || | || |||||| |||| |||| ||| Sbjct 2203 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAA 2262 Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711 || || || || || ||||| | ||| || || ||| || ||||||||||||||| Sbjct 2263 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 2322 Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGG 155771 || || | |||||||| || || ||||||| || || || | |||| ||| | Sbjct 2323 TTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATCGACTTCCATAAC 2382 Query 155772 TCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTT 155831 || | || | | ||| || | ||| ||| |||||||| |||| | ||| Sbjct 2383 TCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGTATATA--GTT 2440 Query 155832 CGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCG 155889 | || ||||| || | || ||| || ||||| || | || || || | || Sbjct 2441 CTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAGTCATGAGGACACATGAGAC 2500 Query 155890 ACCAAATTTTATTACCGAT--TACACGCTCCATAAATACATCACTCGCCCAAATAGCATA 155947 ||||| || || || | ||| | | |||||| | ||| ||| | |||||| Sbjct 2501 TCCAAACTTCAT--CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATA 2558 Query 155948 GAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAAGAATT 156006 || || || || || | || || | || ||| |||||| || || ||||||| Sbjct 2559 AAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-TTCTTCTTTAAATCCAAGAATT 2617 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATTCCTCTTGC 156063 | || || | ||| ||||| | ||| || ||||| || | | || | Sbjct 2618 CAAATATGTCCGCATGCCAAGGCTCTAAATAAATTGCAAATGCGCCGGGACGTTTGTTTC 2677 Query 156064 CACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 |||| ||||||||||| | ||||| || || | || | | ||| || | | ||||| Sbjct 2678 CACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCAT 2737 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT--TATGAATATG 156181 | || ||||| || || || | ||||| ||||| || ||| |||| Sbjct 2738 TTGAGACCCCATTAGTGCCAGCTATGTAAGAACC--CTGAGCTCTGATGCAATGTGTATG 2795 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 || || || ||||| | ||||||||||| || |||| |||| ||||| ||||| Sbjct 2796 TAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAAT 2855 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGG 156301 ||||||||| ||| |||| ||| | || || | || || | || || || || Sbjct 2856 ACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAACAGGAGGAAAGCTGTGGCCGCGG 2915 Query 156302 TGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 ||| | ||| ||| |||||||| ||||||| ||||||| || | ||||| Sbjct 2916 TGTGGCTGCGGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 2969 >seq19418 Length=15813 Score = 125 bits (138), Expect = 2e-23 Identities = 208/295 (71%), Gaps = 8/295 (3%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611 ||||||| | ||||| || || ||||| ||| ||||||||||| ||||| ||||||| Sbjct 5710 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGTTGAATGTAACCAG 5768 Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671 || || ||||||||||| |||||||| ||||| ||||||| ||||| || ||||| Sbjct 5769 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAAT 5828 Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731 | | ||| ||| | || ||| | || | || |||||||| | | || | Sbjct 5829 AAAACTCAGAGGGTGTCAAGCCAGCAAGGTAAGAATTTTCGACGAAACCTCTAGATTCTG 5888 Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788 | || ||||||| ||| | || ||||||| || || || | | ||| | || | Sbjct 5889 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 5945 Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||||||||| ||||||||||| || || | || | ||| | ||| || || || Sbjct 5946 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 6000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468724377538110