Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1115 129 7e-24 seq18858 100 3e-15 >seq1115 Length=4048 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | || | ||||| |||||| | ||| | | || Sbjct 299 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 240 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| | |||||| |||| || || || ||||||| | |||| || |||| | Sbjct 239 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 180 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| |||| Sbjct 179 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 120 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || |||||||| ||||||||| Sbjct 119 GGACTTGTTTGAGCACTTTGTAGATG 94 >seq18858 Length=2356 Score = 100 bits (110), Expect = 3e-15 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||| || |||||| | | || || || |||| |||||| | || | || ||||| Sbjct 710 TGGCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCG 651 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | | |||||| |||||||||| ||| || |||| ||||||| || | || | Sbjct 650 TTGACCTCTTGTTGTAGTGCGCCAGGCGGGACGCTTCGGCCGCGATGCGTTCAAAAATAT 591 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| | Sbjct 590 CGTTGACAAAGGAATTCATAATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAA 531 Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548 ||||||| | ||| ||||| ||| Sbjct 530 CCTGCTTCAACACTTTGTAAATG 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6093678130047510