Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4760 203 3e-47 seq20852 179 3e-40 seq20122 114 1e-20 seq22953 95.1 1e-14 seq19342 87.8 1e-12 >seq4760 Length=15745 Score = 203 bits (224), Expect = 3e-47 Identities = 136/152 (89%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 ||||| | ||||||||||| |||| || |||||||||||||||||||||||||||||| Sbjct 10914 GCCGGCCTGCCAAGCGCCTTAGCGACCTCCGGCATGTTGACGATGACAGTCTTGATGCCG 10855 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 10854 TTCCCCTTACCCTCGACCTTGGCGCAGATGCGCGGCATCTTGTAGCGGTAGAACGCGTCC 10795 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 |||||||| | ||| |||||||| | |||||| Sbjct 10794 GCCACATTCCTGTTCACGTTCACGGACCCCAT 10763 Score = 113 bits (124), Expect = 4e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 34201 GCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA 34260 || |||||||| |||||||||||||| || || ||||| ||| | | | |||||| Sbjct 13883 GCGGGCGGGTTCTTCAGTATGAAGGTATTCAGTTTATGGTTGAATTCCAAGGGGCCGTGG 13824 Query 34261 TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCA 34320 || ||||| || |||||||| || |||| ||||| | || | |||||| || ||||| Sbjct 13823 TACCCGCACGCCTTGCAGCCTTGCGAGATGGTGTTCCTCTTGGTGGACACTATCAGCTCC 13764 Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 ||||| || ||||| || || ||||| | || || ||||| || || Sbjct 13763 GTCTCGGGATTGTCGCACTCGGGACAGAGGACGAATTTGCGAATAAA 13717 Score = 111 bits (122), Expect = 1e-19 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || | ||| ||||| ||||| ||||||| ||| ||||||||||||||| || ||| Sbjct 12938 CCGTCCAACAGATCCTGCAACTTGGCGGAGTCATGGCTGCCGTTGACGATGAAGCGCTCG 12879 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || ||| | |||| ||||||||| ||||| ||||| || ||||||||||| || || Sbjct 12878 TTCTTGAAGTCGAACTGCGTTTGGGCGCCGAGCTCACATCCGAAGTACTTAGTGGG 12823 >seq20852 Length=11699 Score = 179 bits (198), Expect = 3e-40 Identities = 581/892 (65%), Gaps = 19/892 (2%) Strand=Plus/Plus Query 28881 CATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTTAAA 28940 ||| || | |||||||| | || ||||||||||| ||||| |||| || | ||| Sbjct 2248 CATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAATGATAGTTTAAAA 2307 Query 28941 ACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGTTCAGATTTTAAA 29000 || || ||||| |||| || || || || || | ||||||| || |||||| Sbjct 2308 GAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAGGACTTTAAA 2367 Query 29001 GTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGCGTGTCTGCGTGG 29060 || | || |||||||| ||||| ||| |||||||||| ||||| || ||||| | ||| Sbjct 2368 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGG 2427 Query 29061 AACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGCCAAGTTGGCCAATCCACAC 29120 |||||||||||||||||||| || || || | ||| | || ||| || | Sbjct 2428 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 2487 Query 29121 ATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACCCTTT-TTATTTT--ATG 29177 | || ||||| || || || || || ||||| | |||| ||||| || |||| | Sbjct 2488 TTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTT 2547 Query 29178 CACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGTCGAGGAATTTTTGCAGGTGTGG 29237 || | | ||| | || |||||| | || || |||| || | | ||| Sbjct 2548 GACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTAAAGGAGTTCCTTCTAACATGG 2604 Query 29238 AAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAAAGGCGCTAACCC- 29296 ||||| || || || || || || || ||||| || || || || ||||| |||||||| Sbjct 2605 AAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAGGTGCTAACCCT 2664 Query 29297 GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTACTGAAGGAATTGCG 29356 ||| || || | | || || | || ||| | ||| |||| ||||| || Sbjct 2665 GAC-CTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACG 2720 Query 29357 CGCAATGCTGGATAAACTGCAATTGCAAACGGGTAAAACGTATGAATTGACAAGCGCAAT 29416 | ||||| ||| | || | | | ||||| | || ||||| || || || Sbjct 2721 TGAGATGCTCGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGAATTAACTTCTGCTAT 2780 Query 29417 CAGCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGACGTTGTGCAAAAATTTCTTGA 29476 ||| |||| || ||||| || || | |||| | | ||||| | | | || Sbjct 2781 TAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGGCTCAAAATTATATGGA 2840 Query 29477 TAAAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGGTCAAACACCGATTTGGGATA 29536 | | || || | ||||||||||| || || || || |||||||| | | ||| | Sbjct 2841 TCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAATGATACTCTTGGACA 2900 Query 29537 TCAAACTACACTCTACGCACCGAGTTGGAATCCCAACGAGCTTTACAACACTGACCACGC 29596 |||||| || | ||||| || ||||||||||| || ||||| ||||| || Sbjct 2901 TCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTTACACATCTGACTTCGG 2960 Query 29597 CGTAAAGTCGCTCACTAAC-CAAGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCA 29655 ||||| | || || | || || ||| | || || ||| | || || || || | Sbjct 2961 AGTAAAAT-ACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTA 3019 Query 29656 TGTACGGCCGCGGTTGGACGGGCGTGACCGGTTACGTCGGTGACAACTAT---TTTAAAG 29712 |||| || || |||||||| ||||| | ||| | |||||| | || | || Sbjct 3020 TGTATGGTCGTGGTTGGACTGGCGTTCATGATTA---CAAAGACAACATTCCCTTCACAG 3076 Query 29713 GCACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACGGAGTTGTCGACTA 29764 ||| ||| | || || || | || |||||| | |||||||| || ||||| Sbjct 3077 GCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGTTGACTA 3128 >seq20122 Length=23100 Score = 114 bits (126), Expect = 1e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 110264 AGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACG 110323 ||||| | |||||||| || || ||||||||||| || ||||| || || | ||| | Sbjct 12007 AGATTCATCATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTG 11948 Query 110324 GAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCC 110383 || || ||||| ||| | ||||| |||||| ||||| |||||| | || Sbjct 11947 GAAGCTTCTGATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCT 11888 Query 110384 GTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCG 110443 |||||||||||||| |||| || || || || ||||| |||| | ||| || | Sbjct 11887 CCAGATCAACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCA 11828 Query 110444 GATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || || || || || || |||||||| |||||| | ||||| | || || || |||| Sbjct 11827 GACTATAATATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTACGGGGTGGAA 11770 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || || || || | || ||||| || || || | ||| |||||| Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| | | | || ||| ||| ||| || ||||| || | ||| ||||| Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 11652 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||||||||||| ||| || || ||||| || |||| | ||| | | |||||||| Sbjct 11651 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAA 11592 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||| ||||||||||| |||||| | || || | ||| |||| |||| Sbjct 11591 CATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGAA 11542 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| || || |||||||| ||||| | ||| || || Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | || || |||||| ||||| |||||| | || |||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 10283 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| ||| || || || ||||| |||| | ||| || | || || || Sbjct 10282 CAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 10223 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || ||||||||||| | ||| | || | ||||| |||| || Sbjct 10222 ATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 10176 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| | || |||||||| |||||| | ||| ||| || Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || |||||| |||||||||||| | || |||||| Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 11195 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||||| |||| || || || || ||||| |||| | ||| || | || || || Sbjct 11194 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 11135 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || || || || ||||| ||||| | || || | || |||| |||| Sbjct 11134 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAA 11086 >seq22953 Length=36863 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||||||||| || |||| ||||| || || || | ||| |||||| Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | ||||| |||||| || ||||| || | ||| |||||| Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 13650 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||| | ||| || |||||||| || |||| | || || | || |||||| Sbjct 13649 CAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 13590 Query 110453 ATTCAAAAAGAATCTAC 110469 || |||||||| ||||| Sbjct 13589 ATCCAAAAAGAGTCTAC 13573 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || || ||| | || || || ||||| || | || |||||| Sbjct 12857 ATGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCT 12798 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | || || ||||| ||||| || ||| | ||| || ||| Sbjct 12797 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAA 12738 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| ||||||||| ||||||||| | | || || |||| || ||| Sbjct 12737 CAGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAAC 12678 Query 110453 ATTCAAAAAGAATCTACGTTGCA 110475 || |||||||||||||| ||||| Sbjct 12677 ATCCAAAAAGAATCTACTTTGCA 12655 Score = 86.0 bits (94), Expect = 5e-12 Identities = 168/247 (68%), Gaps = 1/247 (0%) Strand=Plus/Minus Query 110256 TTTATAAGAGATTT-AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314 ||| | | |||| | |||||||| || ||||| ||||| | || || ||||||||||| Sbjct 14471 TTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACT 14412 Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374 | ||| || ||| ||||||| | | | |||||| || ||| ||||| ||| Sbjct 14411 TTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAA 14352 Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434 ||| | || ||||||||| | | |||| || || || || | || || | | Sbjct 14351 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGC 14292 Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494 || | | || || || ||||||||||||||||| | ||| |||| || | || || Sbjct 14291 ACTCTTTCCGACTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGT 14232 Query 110495 GGGGGAA 110501 || |||| Sbjct 14231 GGTGGAA 14225 >seq19342 Length=14378 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || ||||| || | || || |||||||||||| |||| |||| | Sbjct 4267 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 4208 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | |||||| || || || || ||||| | || || || Sbjct 4207 TGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 4148 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | | || | ||| |||||||| || || |||| | ||| || | || ||||| Sbjct 4147 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 4088 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||||||||| ||||| || ||||| | ||| | |||| || || || || Sbjct 4087 CATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAA 4037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412016281906790