Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq22953 134 2e-26 seq20122 132 8e-26 seq19342 104 4e-17 >seq22953 Length=36863 Score = 134 bits (148), Expect = 2e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || ||||| |||||| | || || |||| | || Sbjct 14452 TGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 14393 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| ||| || ||||||||||| || ||||||| Sbjct 14392 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 14333 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || |||||||| || | || | | || ||||||| Sbjct 14332 AACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTATAATA 14273 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || || ||||| || Sbjct 14272 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 14239 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | ||||||||||| || ||| | || ||||||| || Sbjct 14224 TGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCG 14165 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || || || ||| ||||| || ||||| || ||||||| Sbjct 14164 ACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 14105 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||| | || ||| | || ||| | |||||||||| Sbjct 14104 AGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATA 14045 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| ||||| || | ||||||||||| || Sbjct 14044 TTCAAAAGGAATCTACCCTACATTTAGTATTGCG 14011 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||||||||||||| | || || ||| | | Sbjct 13996 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 13937 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| |||||| ||| ||||| ||||| ||||| ||||| | Sbjct 13936 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGC 13877 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| ||||| ||||| || ||| | | || | | || || || | Sbjct 13876 AGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACA 13817 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 | ||||| || ||||| | ||| ||||| | || | |||| |||| ||||||| Sbjct 13816 TCCAAAAGGAGTCGACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTATGCAAATATT 13759 Score = 118 bits (130), Expect = 2e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||||| || ||||| || ||||| | || ||||||| | Sbjct 13540 TGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTG 13481 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||||||||| ||| || ||||| || || || |||| Sbjct 13480 ACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAAC 13421 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || |||||||| || || | | || || | ||||| |||| Sbjct 13420 AGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAATA 13361 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || ||||| || || | || ||||| Sbjct 13360 TTCAGAAAGAGTCAACCCTGCACTTAGT 13333 Score = 104 bits (114), Expect = 4e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||||||||| | |||||| | || ||||||||||| ||| | || || || ||| | Sbjct 13312 TGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCA- 13254 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || || ||| ||||||| ||| || || ||| ||| ||||| ||||| || |||||| Sbjct 13253 GACACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 13194 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || || || ||||| ||| | || ||| | || | | || || ||| Sbjct 13193 CAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAAT 13134 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || ||||| || || | || || ||| | || | ||||||||| Sbjct 13133 ATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGGTA 13085 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || || || || ||| | || || || | | Sbjct 12856 TGCAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCTG 12797 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || ||| || ||| || || |||||||| || || |||| Sbjct 12796 ACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAAC 12737 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||| ||||| |||||||| || || ||| | || | | || ||||| | Sbjct 12736 AGCGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAACA 12677 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||||||||| ||| | ||||||||| Sbjct 12676 TCCAAAAAGAATCTACTTTGCATTTAGTA 12648 >seq20122 Length=23100 Score = 132 bits (146), Expect = 8e-26 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| ||| | || || ||||| || ||| | || || ||| | | Sbjct 11085 TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTG 11026 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| ||| |||||| ||| || ||||| ||||| || ||||||| Sbjct 11025 ATACAATAGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAAC 10966 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | | || || |||| ||||||| Sbjct 10965 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTATAATA 10906 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | |||||||| || || ||||||| || Sbjct 10905 TCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 10860 Score = 129 bits (142), Expect = 9e-25 Identities = 146/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||| || || ||||| |||||| | || |||||| | | Sbjct 10401 TGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCTG 10342 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||| || || || ||| || ||||||||||| || ||||||| Sbjct 10341 ATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 10282 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| || || ||| | || ||| | || || |||| ||||||| Sbjct 10281 AAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATA 10222 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 10221 TCCAGAAAGAATCTAC 10206 Score = 116 bits (128), Expect = 6e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| ||||| || ||||| || || | || || ||| | | Sbjct 11997 TGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCTG 11938 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| ||||| || || ||| || ||||||||||| || ||||||| Sbjct 11937 ATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 11878 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || | |||| ||||||| Sbjct 11877 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAATA 11818 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || ||||| ||| | || ||||| || || Sbjct 11817 TCCAGAAGGAATCTACTTTGCACTTAGTGTTGCG 11784 Score = 114 bits (126), Expect = 2e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || || ||||| ||||| | || || ||| | | Sbjct 11313 TGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTG 11254 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || || || || |||||||||||||| || ||||||| Sbjct 11253 ACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAAC 11194 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 11193 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATA 11134 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | |||||||| || || ||||||| || Sbjct 11133 TCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 11088 >seq19342 Length=14378 Score = 104 bits (114), Expect = 4e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| | || || || | Sbjct 4265 TGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCTG 4206 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| || || | Sbjct 4205 ATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGC 4146 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| ||||||||| |||| ||| | || || | || || || | Sbjct 4145 AACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACA 4086 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263 | ||||| ||||| || | ||| | || | ||| | | |||||||| || Sbjct 4085 TTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTA 4034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784554464067600