Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq20852 199 4e-46 seq22953 102 8e-17 seq5945 100 3e-16 seq39065 86.0 6e-12 seq20122 82.4 7e-11 >seq20852 Length=11699 Score = 199 bits (220), Expect = 4e-46 Identities = 774/1202 (64%), Gaps = 31/1202 (3%) Strand=Plus/Plus Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853 |||| || ||||| || || |||||||| || || | | || ||||| || | Sbjct 2170 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATA 2229 Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913 || || || || | || ||||||||||||||| | || || |||||||| | ||| Sbjct 2230 CCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGC 2289 Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973 ||||| ||| ||||| | ||||| ||| | || || || || || || | Sbjct 2290 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGC 2349 Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033 ||||| | ||||| || || | ||||||||||| ||||| || |||| ||||| || Sbjct 2350 GGCCGTGAGGACTTTAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 2409 Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCTG 25093 ||||| |||| | ||||||||||| ||||| |||||||||||||| | ||| | || Sbjct 2410 AAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTA 2469 Query 25094 AAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGAC 25153 || | ||| ||| | | || | || || || || || || |||||||| |||| Sbjct 2470 AAACAAGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGAT 2529 Query 25154 CCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAGA 25212 || |||||| | ||||| | | | | ||| ||| | | || || | || Sbjct 2530 CCTTTCTTCTTTTTAGTTGACAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGGA 2588 Query 25213 GTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCGG 25272 || ||| | || ||||| ||||| || || || || ||||||||||||| || || || Sbjct 2589 GTTCCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 2648 Query 25273 CAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGCCACCTACACTACCCT 25332 ||| || || ||||| ||| | || | ||| || ||| | | || | | Sbjct 2649 CAAAGGTGCTAACCCTGACCTCGGTA--GCCCAG-AAGATGGTGATTGTTATGTAAGTTT 2705 Query 25333 GTTGGCGGAGCTGCGCGCGATGCTCGACGCGCTCGGTGCCCACCAAAACCGCCACTACCT 25392 | || || | || | ||||||||| | |||| || | | | ||| Sbjct 2706 GATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGA 2765 Query 25393 GCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTCGTCGACTACACTGAGGC 25452 | ||| || |||||||| || || || ||| || || |||||| |||| Sbjct 2766 ATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGGC 2825 Query 25453 GCAAAAGTATCTCGATCTGATATTCCTCATGTCGTACGATTTTAAGGGCGGCTGGTCGCT 25512 ||||| ||| | |||| || ||| | ||| ||||| || ||||| | |||||| Sbjct 2826 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTC--- 2882 Query 25513 CAACGA---GCTCGGTCATCAGACGGCGCTTTACGCGCCCCCGTGGCGGCCCGACGAACC 25569 || || || || ||||| ||| | | |||||||| ||||| ||| | ||| | Sbjct 2883 AAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAAC 2942 Query 25570 GTACTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGCAACACGTG---CCCAAGAACAA 25626 ||| | ||| || || | |||| ||||| ||| || ||| || Sbjct 2943 TTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAG---AA 2999 Query 25627 GATTGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGACGGGCGT---AGCGAGCGACGA 25683 |||||| | || ||||| ||||| || || || ||||| ||||| | | | || Sbjct 3000 GATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGA 3059 Query 25684 CAGCGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTCCCCGGCACCTGGGAGGACGG 25743 || ||| ||| ||| |||| ||| || || || ||| || || ||| | ||||| Sbjct 3060 CA---ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGG 3116 Query 25744 CGTCGTCGACTATCGACAGATTGC---TCACA-ACCTCACG--CAGTACACGTACGCGTA 25797 || || ||||| | ||||||| | | | |||| | ||| || | || Sbjct 3117 AGTGGTTGACTACAGGGAGATTGCGAATGAAATTGCTCAAGGCAAGTGGGAGTTCCATTA 3176 Query 25798 CGACGACGTTGCCAAGGCGGCGTACATTTATCGCGCATCCGACGG-CAACTTGATTAGCT 25856 |||| | || ||| | || | ||| ||| | |||| || | |||| | | || Sbjct 3177 CGACAATGTCGCCCAAGCCCCCTACGTTTTCAGACCATCAACTGGAGATCTTG-TAACCT 3235 Query 25857 ACGACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGTATTGGACCACGAGCTGGCCG 25916 | || | ||| || || | | |||| ||||||||| | || |||| | | Sbjct 3236 ATGATAATGCTAGATCCGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGAG 3295 Query 25917 GTCTGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCTGCTCAACGCCATGAACAAGG 25976 |||| ||||| |||||| | ||||| || ||||||||||| || || |||||||||| || Sbjct 3296 GTCTCTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAATGCCATGAACATGG 3355 Query 25977 GT 25978 || Sbjct 3356 GT 3357 >seq22953 Length=36863 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||||||||| |||||||| || | || | | | ||||| ||||||||||| Sbjct 12889 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCA-TCCTCCAGCTGCTTGCC 12947 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| || || || || || || || || || ||||| |||| || |||| Sbjct 12948 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTT 13006 Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||| || || || | |||| ||||| || ||||| | Sbjct 13007 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTG 13066 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 13067 TCTTTACAAAGATCTGCAT 13085 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||||||||| ||||||||||| || ||| ||| ||| || | Sbjct 13336 AAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGAC-CGTCTTCCAA 13394 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || || ||||||| ||||| ||||| || |||||||| ||||| || || Sbjct 13395 TTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATC-CTGTA 13453 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | ||||| ||||| | || || || || | ||| | ||| || | Sbjct 13454 TTTTAGCTTTGACATTCTCAATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTC 13513 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| ||||| || || || ||||| Sbjct 13514 CAGTCAATGTTTTGACAAATATTTGCAT 13541 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| |||||||| || || ||| | || || || Sbjct 13108 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCTTCCAGT 13167 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || || || || || || ||||| || |||||||| || ||| Sbjct 13168 TGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATC-TTGAAT 13226 Query 133575 TTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || |||| | | | |||| ||||| | ||||| || || | || | ||||| || Sbjct 13227 CTTGGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTTCC 13286 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || || || ||||| Sbjct 13287 AGTAAGTGTTTTGACAAATATTTGCAT 13313 >seq5945 Length=4136 Score = 100 bits (110), Expect = 3e-16 Identities = 432/680 (64%), Gaps = 6/680 (1%) Strand=Plus/Plus Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 ||||| |||||||| || || ||||||| | ||| || || || | || || ||||| Sbjct 1687 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 1746 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 |||| || || || ||||||||||| | ||| ||| || || || | ||| Sbjct 1747 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 1806 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490 |||||||| || | || || || |||||| || ||||| || || || |||| Sbjct 1807 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 1866 Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550 || || || || | || | |||||| | || | | || | ||| || || || Sbjct 1867 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 1926 Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610 || | || || || ||||| || || ||||| ||||| || || ||| Sbjct 1927 TCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 1986 Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670 |||||||| | || | || | ||||||||| || || | |||||| || || | ||| Sbjct 1987 CTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 2046 Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727 || || | ||| | || || || | ||| || || ||||| || Sbjct 2047 ATAGGTCTATGTCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAATTAACA 2103 Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787 || || | |||| | ||| | || | |||||| ||| | || |||| Sbjct 2104 TCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAA 2163 Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847 | | ||| || | | | | ||| | || || || || || |||||||| ||| Sbjct 2164 TTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 2223 Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACG 148907 ||||| | |||| | || | ||| | ||| |||||||| ||||| || | Sbjct 2224 ACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 2283 Query 148908 CCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCG 148967 || | || |||||||| ||||| ||||| || || ||||| |||| |||||| ||| Sbjct 2284 CCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 2343 Query 148968 CCAGTTTCCACCTGCGTTTC 148987 ||||| ||||| || | ||| Sbjct 2344 CCAGTCTCCACTTGGGCTTC 2363 >seq39065 Length=2902 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 133535 CCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAAC 133594 || ||||||||| || || || || || ||||| |||||| ||||| | ||| | Sbjct 2753 CCTCTGCTGGTCTGGGGGAATCCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGAT 2694 Query 133595 CGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAAT 133654 ||||| | |||||| || || | ||||| ||| || || || || ||||| |||||||| Sbjct 2693 AGTGTCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAAT 2634 Query 133655 CTGCATG 133661 ||||||| Sbjct 2633 CTGCATG 2627 >seq20122 Length=23100 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || ||||| ||||| ||||| || || || ||| ||| | || || || Sbjct 10881 AAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGACCA-TCTTCCAG 10939 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| || | || || || ||||| || ||||||||||| ||| Sbjct 10940 TTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCTGGAGGAATACCTTCCTTGTC-TTGAA 10998 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | | || | || || | | ||||| || | |||| ||||| | Sbjct 10999 TTTTAGCTTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCC 11058 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || ||||| ||||| ||||| Sbjct 11059 CAGTCAGTGTCTTTACAAAAATTTGCAT 11086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482429606077200