Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5945 181 3e-40 seq19418 125 2e-23 >seq5945 Length=4136 Score = 181 bits (200), Expect = 3e-40 Identities = 429/644 (67%), Gaps = 13/644 (2%) Strand=Plus/Minus Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579 || || || ||| ||| || || || ||| ||||||||||||| |||| || | ||| Sbjct 2897 TCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAA 2838 Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634 || ||| | ||||||||| |||| || || ||| || ||| || ||| | | Sbjct 2837 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 2778 Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694 ||||| || | | || || | || || | |||| ||| || || |||| Sbjct 2777 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 2723 Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751 |||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | | Sbjct 2722 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 2663 Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811 || ||||||| || ||| | || ||||||||| | || |||||||||||||| || | Sbjct 2662 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGACATATTTGAATTCTTGGATTTAA 2603 Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871 || || ||| |||||| ||||| | || | |||||||| | ||||| Sbjct 2602 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 2543 Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931 ||||| | || |||||| | || || | ||| | ||| ||| |||||||||||| Sbjct 2542 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 2483 Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991 | |||||| || |||| | |||| | || |||||||| || || ||||||| Sbjct 2482 ACTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATACCAAATATG 2423 Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051 || ||||| ||| |||||| | ||||||||| | ||| || | | Sbjct 2422 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCGATTATAG 2363 Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111 || | ||||| || ||||| || || || || |||||||| ||| | ||| | || Sbjct 2362 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 2303 Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 |||||||| ||| | || || ||||| | ||| ||| | ||| Sbjct 2302 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2259 >seq19418 Length=15813 Score = 125 bits (138), Expect = 2e-23 Identities = 350/520 (67%), Gaps = 34/520 (7%) Strand=Plus/Minus Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 ||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| ||| Sbjct 7314 CGCTTAAAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 7255 Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100 ||| |||| |||||||| |||||| || || ||| || || || || ||||||| || Sbjct 7254 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCC 7196 Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159 ||||| ||| ||||||| ||||| ||| | || | || ||| | | Sbjct 7195 TCGCTCTATTGCCCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 7137 Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217 || || |||| |||| || |||||| ||| ||||||||||||| ||| Sbjct 7136 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 7084 Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275 | | | || || | ||| | ||| | ||| | || || ||| | || ||| Sbjct 7083 ATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG- 7029 Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327 || ||| | ||| |||| |||| | | || |||| ||| |||||| Sbjct 7028 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACGATGATT 6975 Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387 |||| | |||||| | |||||| | |||| |||||| |||||||| ||| | || | Sbjct 6974 TGGTTATTTTCAATCGACAACCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 6915 Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447 ||||||| | | | |||||||| | ||| | ||| | |||| || ||||| | Sbjct 6914 AAGTATTGCCGTGGTCTACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTG 6855 Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 ||||||| || || ||||||||| | |||||||||||||| Sbjct 6854 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184318553422830