Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq22953 125 5e-24 seq20122 107 1e-18 >seq22953 Length=36863 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| || ||||| || ||||| |||||||| || || || ||||| Sbjct 14227 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAA 14286 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| |||| || ||||| ||||| || ||||||||||| || |||||| | || Sbjct 14287 AGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 14346 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| |||||| | || |||| || | || ||| | ||| || Sbjct 14347 ATGCCTTCCTTGTCTTGAATTTT-GGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 14405 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || |||||||| || | ||||| |||||||||||||| Sbjct 14406 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 14453 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| |||| |||||||| ||||| || | |||| |||||| || || ||||| || || Sbjct 12858 ACCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 12917 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || || || ||||| | ||| || |||||| | || Sbjct 12918 GAGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 12977 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| |||||||| || || ||| ||||| ||| ||||| | ||| | Sbjct 12978 AATACCCTCTTTGTCTTGGATCTTGGCTTT-AACATTTTCAATAGTGTCTGAGGGTTCAA 13036 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| ||||| | || |||||||||||||||||| Sbjct 13037 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 13086 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| || ||| | || | ||| || || ||| ||||| |||||||| || || Sbjct 13770 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCAGA 13829 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || |||||||| || || ||||| || | |||||||||||| | || Sbjct 13830 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 13889 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || |||||||| ||||| |||| |||| || | ||||| | ||| | Sbjct 13890 GATGCCCTCTTTGTCTTGGATTTTAGCTTTC-ACATTTTCAATTGTGTCAGAAGCTTCAA 13948 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || ||||| || || | ||||| |||||||| |||||| Sbjct 13949 CTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 13998 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || || |||||||| || || ||||| || || ||||| || | ||| || | Sbjct 14011 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 14070 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || |||| ||||||||| |||||||||| | ||| |||||| | || | ||| |||||| Sbjct 14071 TCTTCCAGTTGTTTTCCAGCAAAAATCAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 14130 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGAT 33713 || || || |||| ||| || | |||||| | ||| || || | ||||| Sbjct 14131 TCTTGGATCTTTGCCTTCA-CATTTTCGATAGTGTCGGACGGTTCTACCTCTAAAGTGAT 14189 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| | || || |||||||||||||| Sbjct 14190 GGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 14225 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||| || || || || |||||| || || |||||||| || Sbjct 13315 CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGAC 13374 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||||| |||| |||||||||||||| |||||||| | |||||| || ||| | || Sbjct 13375 AAAGTGCGACCGTCTTCCAATTGTTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGG 13434 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || || || ||||| | || |||| || | ||||| || ||| || Sbjct 13435 ATGCCCTCCTTATCCTGTATTTT-AGCTTTGACATTCTCAATTGTGTCAGATGGTTCTAC 13493 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || || || || || || ||||| ||||| || |||||| Sbjct 13494 TTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCATA 13542 >seq20122 Length=23100 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| ||| | || ||||||| ||| || || || |||||||| || || Sbjct 10404 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCCTTCTGAATGTTGTAGTCTGAC 10463 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||||||| | || || | ||||||||| || ||||| | | ||| || ||| | || Sbjct 10464 AGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAAATAAGCCTCTGTTGGTCTGGAGGA 10523 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 | || || || || |||||| || || ||||| ||| ||||| | || || Sbjct 10524 ATCCCCTCCTTATCTTGAATTTT-TGCTTTAACATTTTCAATTGTGTCAGAAGGCTCAAC 10582 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || |||||||| || | ||||||||||| || ||||| Sbjct 10583 TTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTACAAAAATTTGCAT 10630 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| || || ||||| | ||| ||| || || || || || || || Sbjct 11088 CCACCTCTTAGACGCAAGACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGAC 11147 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | |||||| | || |||| ||| ||||| || ||||||| | || ||||| | || Sbjct 11148 AATGTGCGCCCATCTTCCAGTTGCTTTCCAGCGAAAATCAGTCTTTGTTGATCAGGAGGA 11207 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||| || || | ||||| || | ||||| | |||||| Sbjct 11208 ATGCCTTCTTTGTCCTGAATCTT-TGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCAC 11266 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | || || ||||| || || | ||||| ||||| || ||||| Sbjct 11267 TTCTAAGGTAATAGTTTTGCCAGTCAGTGTTTTCACAAAAATTTGCAT 11314 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||| |||| || | || | ||| ||||| || ||||||||||| || Sbjct 11544 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 11603 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||||||| | || || | || ||||| |||||||| | | ||||||||| | || Sbjct 11604 AGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 11663 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || ||||| || ||||||| | || ||||| || | || || | || || Sbjct 11664 ATTCCCTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATTGTATCAGAAGGCTCAAC 11722 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || ||||| || || ||||| Sbjct 11723 TTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 11770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328046882697600