Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq22953 102 7e-17 seq20122 96.9 3e-15 seq66326 84.2 2e-11 >seq22953 Length=36863 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| |||||||||||||| |||||||||||| ||||| |||||| Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| ||||| || || || ||| | ||| || ||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| ||| || |||||||| ||||| | ||| || |||||||| Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||| || || || || ||||| Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCACTTAGT 13333 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| || ||||| |||||| | || || || |||||||| ||||| ||||| Sbjct 14456 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 14397 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| || ||| | || ||| |||||| ||||| |||||| | || ||| Sbjct 14396 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 14337 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | |||| || || || ||||||||||| ||| | ||| || Sbjct 14336 CAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTAT 14277 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || |||||||||||||| || || || |||||| Sbjct 14276 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTG 14241 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || |||||||| || | || || || ||||| || | || |||||| Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | ||||| ||| || |||||||| || | ||| ||||| Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGATTAC 106436 ||| ||||| |||| ||| || |||||| | |||||| | | | ||| | |||| Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTG--ATTAT 14049 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| |||||||| ||||||||||||||| || | || || || Sbjct 14048 AATATTCAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCGTGGCGG 13999 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||||||| | ||||| || || ||||| | ||| ||| | Sbjct 13997 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 13938 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | |||||| ||||| |||||||| ||| | || |||||| Sbjct 13937 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 13878 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | ||||| | ||| || || ||||| |||||| | || || || |||||| Sbjct 13877 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 13818 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| || || || || ||| ||||| || | | ||||| || Sbjct 13817 ATCCAAAAGGAGTCGACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 13771 >seq20122 Length=23100 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| ||||||||||||||||| || ||||| ||||| |||| | Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | || || ||| ||| ||||| |||||| | || |||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 10283 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| || |||| ||| || || ||| | |||||| || || || || || Sbjct 10282 CAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 10223 Query 106440 ATACAAAAAGAATCTACACTACA 106462 || || ||||||||||| || || Sbjct 10222 ATCCAGAAAGAATCTACCCTTCA 10200 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || || ||| ||||||||||||| || || ||||| || || Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| |||||| || ||||| || | ||| ||||| Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 11652 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||||| ||||||| ||| || || || |||||||| | | ||||| |||||| Sbjct 11651 GCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTAT--CTGATTAC 11594 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| || ||||||||||| | || ||||| | || | |||| ||| Sbjct 11593 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 11543 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||||||||| || ||| ||||||| || || || || ||||| ||| | Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || || ||||||| || ||||| ||| | || || || Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCA 10740 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| ||||| |||| ||| |||||||| |||||||| ||| || || || || Sbjct 10739 ACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 10680 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| | || ||||| || | || |||| || Sbjct 10679 TATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 10632 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| |||||| ||||||||||||| || || ||||| || ||| Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || || |||||| || || ||||| | || || || Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 11424 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||||||||||| ||| || || || | |||||| || || || ||||| Sbjct 11423 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACAA 11364 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTA 106469 || || || |||||||| ||||||||||| Sbjct 11363 TATTCAGAAGGAATCTACTTTACATTTAGTA 11333 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||||||||| |||||| | ||||| || || ||||| | ||| || || Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || ||| ||||||| || || || || | || || ||| Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCTCCAGACCAA 10511 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || |||||||||| || || |||||| | |||||| || || || |||||| Sbjct 10510 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAC 10451 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTA 106469 || || || |||||||| ||||||||||| Sbjct 10450 ATTCAGAAGGAATCTACTTTACATTTAGTA 10421 >seq66326 Length=6876 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 || || || |||||| |||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct 5770 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 5711 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 || ||| ||| | | ||| ||||| || || || || | || |||||||| || Sbjct 5710 ATTATGAAATGGGTTGCGGGTGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 5651 Query 99758 TGCCCGTTTATGCAGC 99773 ||||| || ||| || Sbjct 5650 TGCCCCTTCCTGCGGC 5635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401525296610240