Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201
5-12-17] 164,030 sequences; 282,526,854 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5945 623 1e-173
seq13889 91.5 2e-13
seq67391 87.8 2e-12
seq46256 84.2 3e-11
>seq5945
Length=4136
Score = 623 bits (690), Expect = 1e-173
Identities = 1126/1629 (69%), Gaps = 23/1629 (1%)
Strand=Plus/Plus
Query 68354 TTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGAT 68413
|||||||| | || || | ||||||||||| | | ||| |||||||| |||| |
Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336
Query 68414 AGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG 68473
||||||| || ||||| | ||| | |||| ||| |||||| || || |||||
Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396
Query 68474 AATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTC 68533
||| | || | || | ||| || || | ||||||||||| || || ||||||||||
Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456
Query 68534 TATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAAT 68591
|||| || ||||| | ||| | ||| | | ||| ||||| | || || | ||||
Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516
Query 68592 CTGTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGATCCACCATCGGATATAAT 68648
|| || || || | |||| | | ||| | || |||||| | | |||||||
Sbjct 1517 CTCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAAT 1574
Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708
| || || || || |||| |||||| | | || ||| | | || ||||| |
Sbjct 1575 AAGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 1634
Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768
|| |||| ||||||| |||||||| ||||| | ||||||||| ||| | ||
Sbjct 1635 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 1694
Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828
||| | ||||||| | || || |||||||| ||||| || ||||| |||||||| || |
Sbjct 1695 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTAT 1754
Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
||||| | ||| | | ||||||| || || || ||||| || ||| |||||
Sbjct 1755 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCA 1814
Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948
||| || | || | ||| | ||| || || || || || | ||||| |
Sbjct 1815 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGAC 1873
Query 68949 TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATG 69007
||| || |||||| || | ||||| | |||||||| ||||||||| || |||||||
Sbjct 1874 TCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATG 1933
Query 69008 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGA 69067
|||| |||||||||||||| || || | | ||||||| | ||||| ||| |||
Sbjct 1934 CACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 1993
Query 69068 ATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
| | ||| | | | | | ||| |||||||||| |||||||| |||||||| ||||||
Sbjct 1994 AAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 2052
Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186
||||||||| |||||||| ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 2053 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 2112
Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|| || | |||| | ||| | || | || |||| ||| ||||| |||||
Sbjct 2113 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG 2172
Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT-- 69304
|| | ||||||||| || ||||||| || || || || || ||||| || ||||
Sbjct 2173 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCT 2232
Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364
| | || ||||| | | ||| || || ||||| |||||||| ||||| || ||||
Sbjct 2233 TCTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 2290
Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424
||| |||||||||||| ||||||| || ||||| || | || | || |||||||| |
Sbjct 2291 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 2350
Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG-GTCTTGTAA 69483
| | || | ||| ||||| || ||||| | || || | | | | || || || |||
Sbjct 2351 CCACTTGGGCTTCTATAATCGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATAA 2407
Query 69484 --CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA-TCA 69540
|| || |||| |||||||| |||||||| ||| ||||| ||||| || || |||
Sbjct 2408 ATCGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCA 2466
Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600
| | |||||||| |||| |||||||| | ||| || ||||| | | |||| |
Sbjct 2467 GCGAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 2526
Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660
|||||||| ||||| || ||||| | ||| ||| || ||||| | ||| |||||||
Sbjct 2527 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 2586
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| ||||| || || || | ||| | || || | || || | |||||| || |||| |
Sbjct 2587 TTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAA 2646
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| || || | | || || ||||| ||||| || ||||||| ||||||||||| ||
Sbjct 2647 TAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 2706
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||||| ||||||| ||| || | | |||||| || ||||| || |||| || |||
Sbjct 2707 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 2766
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
|| || | || | || || |||||| || || || |||||| |||
Sbjct 2767 GAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 2826
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
| ||||| |||| || || ||| | ||||| || |||||||| ||| |||| | |
Sbjct 2827 AATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATA 2886
Query 69961 AGAAAACAG 69969
|| ||||||
Sbjct 2887 AGGAAACAG 2895
Score = 100 bits (110), Expect = 4e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194
||||| ||||| ||||||| |||||| |||||| |||||| || |||||||||||||||
Sbjct 3407 TTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 3466
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
||| ||||| || |||| ||| |||| | || ||| ||||| | |||
Sbjct 3467 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516
>seq13889
Length=23247
Score = 91.5 bits (100), Expect = 2e-13
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | |
Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|||||||| ||||||| ||||| || ||||| ||
Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441
>seq67391
Length=3680
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404
|| || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||
Sbjct 3413 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 3354
Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464
||||| | ||| || ||||||||| ||||| ||||||| |||| | || ||||
Sbjct 3353 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 3294
Query 70465 GTAACTCCGTtatata 70480
|| || || |||||
Sbjct 3293 GTTACACCAGAATATA 3278
>seq46256
Length=4484
Score = 84.2 bits (92), Expect = 3e-11
Identities = 97/129 (75%), Gaps = 4/129 (3%)
Strand=Plus/Plus
Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551
||||||| || ||||| || ||| |||| ||| | ||| | || ||| | | ||| |
Sbjct 1328 TTATGACTCCAGTATTA--CCAATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1385
Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611
||||||| |||| ||| |||||| | || | ||||||||||| ||||| || |||||
Sbjct 1386 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 1445
Query 162612 TCATaaaaa 162620
||||||||
Sbjct 1446 CCATAAAAA 1454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 685500379369200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |