Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5945 623 1e-173 seq13889 91.5 2e-13 seq67391 87.8 2e-12 seq46256 84.2 3e-11 >seq5945 Length=4136 Score = 623 bits (690), Expect = 1e-173 Identities = 1126/1629 (69%), Gaps = 23/1629 (1%) Strand=Plus/Plus Query 68354 TTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGAT 68413 |||||||| | || || | ||||||||||| | | ||| |||||||| |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 68414 AGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG 68473 ||||||| || ||||| | ||| | |||| ||| |||||| || || ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 68474 AATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTC 68533 ||| | || | || | ||| || || | ||||||||||| || || |||||||||| Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 68534 TATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTT--AAAAAT 68591 |||| || ||||| | ||| | ||| | | ||| ||||| | || || | |||| Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 68592 CTGTTTGATATCATCTGGAAGGCTCGTATTTT---GAATGGATCCACCATCGGATATAAT 68648 || || || || | |||| | | ||| | || |||||| | | ||||||| Sbjct 1517 CTCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAAT 1574 Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708 | || || || || |||| |||||| | | || ||| | | || ||||| | Sbjct 1575 AAGGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 1634 Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768 || |||| ||||||| |||||||| ||||| | ||||||||| ||| | || Sbjct 1635 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 1694 Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828 ||| | ||||||| | || || |||||||| ||||| || ||||| |||||||| || | Sbjct 1695 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTAT 1754 Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888 ||||| | ||| | | ||||||| || || || ||||| || ||| ||||| Sbjct 1755 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCA 1814 Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948 ||| || | || | ||| | ||| || || || || || | ||||| | Sbjct 1815 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGAC 1873 Query 68949 TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATG 69007 ||| || |||||| || | ||||| | |||||||| ||||||||| || ||||||| Sbjct 1874 TCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATG 1933 Query 69008 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGA 69067 |||| |||||||||||||| || || | | ||||||| | ||||| ||| ||| Sbjct 1934 CACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 1993 Query 69068 ATGGATAATGTAAAAGA-ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 | | ||| | | | | | ||| |||||||||| |||||||| |||||||| |||||| Sbjct 1994 AAG-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 2052 Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186 ||||||||| |||||||| ||| ||||| || | ||||||| |||||| ||| |||| | Sbjct 2053 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 2112 Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246 || || | |||| | ||| | || | || |||| ||| ||||| ||||| Sbjct 2113 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG 2172 Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCAT-- 69304 || | ||||||||| || ||||||| || || || || || ||||| || |||| Sbjct 2173 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCT 2232 Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364 | | || ||||| | | ||| || || ||||| |||||||| ||||| || |||| Sbjct 2233 TCTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 2290 Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424 ||| |||||||||||| ||||||| || ||||| || | || | || |||||||| | Sbjct 2291 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 2350 Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACG-GTCTTGTAA 69483 | | || | ||| ||||| || ||||| | || || | | | | || || || ||| Sbjct 2351 CCACTTGGGCTTCTATAATCGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATAA 2407 Query 69484 --CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA-TCA 69540 || || |||| |||||||| |||||||| ||| ||||| ||||| || || ||| Sbjct 2408 ATCGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCA 2466 Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600 | | |||||||| |||| |||||||| | ||| || ||||| | | |||| | Sbjct 2467 GCGAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 2526 Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660 |||||||| ||||| || ||||| | ||| ||| || ||||| | ||| ||||||| Sbjct 2527 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 2586 Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || ||||| || || || | ||| | || || | || || | |||||| || |||| | Sbjct 2587 TTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAA 2646 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 || || || | | || || ||||| ||||| || ||||||| ||||||||||| || Sbjct 2647 TAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 2706 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||||| ||||||| ||| || | | |||||| || ||||| || |||| || ||| Sbjct 2707 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 2766 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 || || | || | || || |||||| || || || |||||| ||| Sbjct 2767 GAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 2826 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 | ||||| |||| || || ||| | ||||| || |||||||| ||| |||| | | Sbjct 2827 AATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATA 2886 Query 69961 AGAAAACAG 69969 || |||||| Sbjct 2887 AGGAAACAG 2895 Score = 100 bits (110), Expect = 4e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 ||||| ||||| ||||||| |||||| |||||| |||||| || ||||||||||||||| Sbjct 3407 TTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 3466 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244 ||| ||||| || |||| ||| |||| | || ||| ||||| | ||| Sbjct 3467 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq13889 Length=23247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | | Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476 Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAA 40197 |||||||| ||||||| ||||| || ||||| || Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441 >seq67391 Length=3680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 70345 TTTTTTGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || || || || |||||||| ||||| ||||||||||| || | ||| ||||| || Sbjct 3413 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 3354 Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464 ||||| | ||| || ||||||||| ||||| ||||||| |||| | || |||| Sbjct 3353 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 3294 Query 70465 GTAACTCCGTtatata 70480 || || || ||||| Sbjct 3293 GTTACACCAGAATATA 3278 >seq46256 Length=4484 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 162494 TTATGACCCC--TATTAATCCTATGCTAGCAGAATCATGCGATTCCGTTAACAAGGCATT 162551 ||||||| || ||||| || ||| |||| ||| | ||| | || ||| | | ||| | Sbjct 1328 TTATGACTCCAGTATTA--CCAATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 1385 Query 162552 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGATGGTGAACGAGTGCAAGT 162611 ||||||| |||| ||| |||||| | || | ||||||||||| ||||| || ||||| Sbjct 1386 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 1445 Query 162612 TCATaaaaa 162620 |||||||| Sbjct 1446 CCATAAAAA 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685500379369200