Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq20353 152 6e-32 seq68892 105 7e-18 >seq20353 Length=6302 Score = 152 bits (168), Expect = 6e-32 Identities = 205/283 (72%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553 ||||| || | |||||||| ||| |||||| | | |||||| || || || |||| Sbjct 5355 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCCGGTGCGTCCTGC 5296 Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613 |||| ||| ||||||||||| | |||||||| ||||| |||||||| |||||| Sbjct 5295 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 5236 Query 124614 TCCAGGTTTCCGAGCTCGATTGGC-----TTGGCCGTCTTGTTCCACTCCGCCAAACCCA 124668 |||||||| |||||||||| || ||||| ||| || || | ||| Sbjct 5235 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 5178 Query 124669 GTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACA 124725 | || ||||||||||||||||| |||| ||||| ||| | |||||||||||||| Sbjct 5177 GCGTGATCTTGCGCGTCACAAAGTTCTCG---CCGCGGCGCGGACTCTCGTGGTTGAACA 5121 Query 124726 GAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTT 124768 | | || | ||||| ||||| ||||||| ||||||||||| Sbjct 5120 GCACCCCGTTGCACGCGAACATGCCGTACGCTTCGCGGTAGTT 5078 Score = 140 bits (154), Expect = 4e-28 Identities = 203/282 (72%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003 |||||||| | |||||||| ||| || || || | ||| |||||||| || || ||| Sbjct 5355 AACTCGCGCACGCTGTGCGCCTCGCCCGTGGCTACCACGAAGTCCTCCGGTGCGTCCTGC 5296 Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCA 159063 || |||||||||||||||||||| ||||| || ||||||| |||||||| |||||| Sbjct 5295 TGCAGCATGAGCCACATGGCCTCCACGTAGTCGCGCGCGTGGCCCCAGTCACGCTTGCTG 5236 Query 159064 TCCATGTTCCCGAGCTCGA----TGAC-TTTTCCAGACTTTTTCCACTCAGCCAGACCGA 159118 |||| ||| |||||||||| ||| | | || | | || || | || Sbjct 5235 TCCAGGTTGCCGAGCTCGAGGTGCGACATGAGGCCGAGGTGT--ATCTTGGCGACGCCCC 5178 Query 159119 GCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGA--CTCATGGTTAAACAG 159176 |||||||||||||||||||||| | | ||||| || | || ||| ||||| ||||| Sbjct 5177 GCGTGATCTTGCGCGTCACAAAGTTCTCGCCGCGGCG--CGGACTCTCGTGGTTGAACAG 5120 Query 159177 AATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATT 159218 | ||| | || ||||||| | || | |||||||| || Sbjct 5119 CACCCCGTTGCACGCGAACATGCCGTACGCTTCGCGGTAGTT 5078 >seq68892 Length=5759 Score = 105 bits (116), Expect = 7e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 117287 GTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCA 117346 ||| |||| | | | | |||||||||||||| | ||| |||||||| ||||| |||| Sbjct 727 GTCAACGGGGACATGAGTGTGAAAATGTAACGGGGGCTCGCAGCATCTTTGCCCCCAGAC 668 Query 117347 AGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAG 117406 || || ||||| || || |||| || ||||| ||||| | |||||| | |||||| || Sbjct 667 AGGCGGGTACCAAACTGACCACGGGGTTCCAATAGGTTAATGTTGTTCGACCCCACATAG 608 Query 117407 TTTTGAGCCAAGTTGACAATCGT 117429 |||||||||| || || || || Sbjct 607 TTTTGAGCCAGATTCACTATTGT 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546094001994000