Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq20852 235 5e-57 seq22953 158 1e-33 seq20122 140 3e-28 seq19342 89.7 4e-13 >seq20852 Length=11699 Score = 235 bits (260), Expect = 5e-57 Identities = 785/1206 (65%), Gaps = 24/1206 (2%) Strand=Plus/Minus Query 53367 ACCCTTGTGTATCGCATTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAA 53426 |||| ||| || ||||||| || || ||||| || ||||| | |||||| ||||| | Sbjct 3357 ACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAG 3298 Query 53427 TCCACCGAGATCGTTTTCAATCACATACTGGCCCTTGTCTAGCACGGAATCGATGC--TG 53484 || || || | ||| | | ||||| | ||||| || | ||||| || | || | Sbjct 3297 ACCTCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGA-TCTA-GCATTA 3240 Query 53485 TCGTAACTGATTAAATCGCCAGAGTTTTTAT----TGAATACAAACGCTGCTTTGGCTGT 53540 || || | | | ||| |||| || || |||| || | | |||| ||| Sbjct 3239 TCATAGGTTACAAGATCTCCAG----TTGATGGTCTGAAAACGTAGGGGGCTTGGGCGAC 3184 Query 53541 AGTGTCGTAAGTGTAATCGTA-TTGA--TGGCCAATTTT-TTCGTCAATTTTTCGGTAAT 53596 | |||||||| | | || | ||| || |||||| |||| |||| | | ||| | Sbjct 3183 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCATTCG-CAATCTCCCTGTAGT 3125 Query 53597 CAACGACTCCGTCTTCCCATGTGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGAT 53656 |||| |||||||||| ||| || ||| | ||||| ||||| || || ||||| ||| Sbjct 3124 CAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAA 3065 Query 53657 TGTCATCGCGGTAGCCGCTCACTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGAA 53716 ||| || ||| | || ||||||||||| || || ||||| || || || | | Sbjct 3064 TGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTACTA 3005 Query 53717 CAATTTTTTCCTGTTGAACTTTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTGT 53776 |||| || | | | ||| || | ||||| || | | || | |||| Sbjct 3004 CAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGTGT 2945 Query 53777 AATGCTCGCTGGGAGACCAAACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTGT 53836 || || ||||| ||| | |||||||| | | |||||||||||| | | | Sbjct 2944 AAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGTATCAT 2885 Query 53837 TTGACCAAGCGCCTTTAAAATCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGGG 53896 ||||||| || || || || || || ||| || ||||| |||| || | ||| | Sbjct 2884 TTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAG 2825 Query 53897 CGTCGCGATAGTTGACGACCGCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAACT 53956 | | || |||| || || |||||||| || || || || || ||| || | Sbjct 2824 CCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATT 2765 Query 53957 CGAACTTTCGT-CCAGTTTCCAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAAC 54015 || | |||| | ||| | | | | | ||| | ||| | || || ||||| | | Sbjct 2764 CGTA-TTTCTTACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATC 2706 Query 54016 AACACCACATACGTTAAACTATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTTT 54075 || ||||| || ||||| | | | || | | || || ||||| || Sbjct 2705 AAACTTACATAACAATCACCATCTTCTGGGCTACCG---AGGTCAGGGTTAGCACCTTTG 2649 Query 54076 CCGCCAGGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAAT 54135 || ||||| ||||||||||||| || |||||||| || |||||||| || | ||||| Sbjct 2648 CCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGAAC 2589 Query 54136 TCGCGCACGGAATCCACAAACACTTTGCGTTTGGAAGAATCGTGGAAATGGTAAAACGGA 54195 || || || | |||||| | | | || || || ||| | | || ||| Sbjct 2588 TCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGA 2529 Query 54196 TCCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTTC 54255 || | | |||||| || || || || || | | || | | || |||| ||| Sbjct 2528 TCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTT 2469 Query 54256 ACGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTTT 54315 | | ||| | || ||||| |||||||| || || |||||||| | || | |||||| Sbjct 2468 AGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTT 2409 Query 54316 TGCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCCA 54375 || |||||||| | || ||||| ||||| ||||| | |||||||| ||| ||||| Sbjct 2408 TGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGCCG 2349 Query 54376 GCGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTATT 54435 || || | ||||| |||| |||||||| || ||||||||| ||||| || Sbjct 2348 CTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGATG 2289 Query 54436 CCGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGGC 54495 ||||| |||||||||||||| | ||| ||||| | | ||| || | |||||| | || Sbjct 2288 CCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGT 2229 Query 54496 ACTTTGTCCATTGGAAAATTTCGTCCG-TACACTCCCCATTCTACAAAATAGGCGGCCAC 54554 | |||| || |||||| | | || || ||||||||||| || ||||| |||| Sbjct 2228 ATACGATCCA-CGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCAC 2170 Query 54555 AACTTT 54560 |||||| Sbjct 2169 AACTTT 2164 >seq22953 Length=36863 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| || || || || | |||||| | ||||| ||| | || Sbjct 13997 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 13938 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||| ||||||||||| ||||| ||||| ||||| Sbjct 13937 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 13878 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || || ||||||||||| || ||| | || || |||||| Sbjct 13877 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 13818 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||||||| | ||| | || ||||| |||| ||||| || Sbjct 13817 ATCCAAAAGGAGTCGACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTAT 13768 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | |||||| | ||||| ||||| ||| Sbjct 14453 ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 14394 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||||| |||||||| || || |||||| Sbjct 14393 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 14334 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || ||||| |||||| | || ||||||| || || Sbjct 14333 CAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTATAAT 14274 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || ||||| |||||| | || ||||| || Sbjct 14273 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAAT 14224 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| ||||| |||| || ||| | ||||| || ||||| ||||| || Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| || || || || ||||| || || || ||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || ||||||||||||||| || || | || |||||||| Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| ||| | || || || | ||| | || ||||| || Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCACTTAGTGCTTCGTCTCCGTGGTGGAAT 13312 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || ||||| || || |||| || | ||||| ||||| || Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || || ||||||||||| || || || || |||||| Sbjct 13025 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 12966 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| ||||| || |||| || | || | || || ||||| Sbjct 12965 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 12906 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || || ||||| || ||||| || || || || Sbjct 12905 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGTAT 12856 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || || | || ||| | || || ||||||||| Sbjct 14225 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCC 14166 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || ||||||||||| || || || || |||||| Sbjct 14165 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 14106 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || |||||| ||||||| | || | || ||||| || Sbjct 14105 CAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAAT 14046 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 ||||||||||| || ||| ||||||| || ||||| Sbjct 14045 ATTCAAAAGGAATCTACCCTACATTTAGTATTGCG 14011 >seq20122 Length=23100 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| || || || || |||||||||||||||| || || || Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||||||| || || || || || || || ||| Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCTCCAGACCAA 10511 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || |||||| | ||||| | || | || || |||||| Sbjct 10510 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAC 10451 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || |||||||| || | ||| || | ||||| || Sbjct 10450 ATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGGGAT 10401 Score = 129 bits (142), Expect = 5e-25 Identities = 178/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| ||||| ||||| ||||||| | ||||||||| | || Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| ||||| |||||||||||||| || || |||||| Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 11195 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || || ||| ||||||| | || | || || || || Sbjct 11194 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 11135 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 || || |||||||| || || ||||| || |||||| | | ||||| || ||| | | Sbjct 11134 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAAT-GCAA--ATT 11078 Query 27228 TTTGTAA 27234 ||||||| Sbjct 11077 TTTGTAA 11071 Score = 123 bits (136), Expect = 2e-23 Identities = 177/247 (72%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || |||||||| || ||||| || || |||| ||| | ||||||||| | || Sbjct 11086 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 11027 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| |||||||||||||| ||||| || || || |||||| Sbjct 11026 GATACAATAGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 10967 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | ||| || || ||| ||||||| || || | || || || || Sbjct 10966 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTATAAT 10907 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 || || |||||||| || || ||||| || |||||| | | ||||| || ||| | | Sbjct 10906 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGGAAT-GCAA--ATT 10850 Query 27228 TTTGTAA 27234 ||||||| Sbjct 10849 TTTGTAA 10843 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||||||||| ||||| |||||| |||| || || ||||| || || || Sbjct 11542 ATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTCT 11483 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||| || ||||| || || || || ||| Sbjct 11482 GACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCAA 11423 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | ||||| | || | || || ||||| Sbjct 11422 CAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACAAT 11363 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || |||||||| || | ||| || | ||||| || Sbjct 11362 ATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGGGAT 11313 Score = 114 bits (126), Expect = 1e-20 Identities = 175/247 (71%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || |||||||| || ||||| || || |||| ||| | ||||||||| | || Sbjct 10858 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 10799 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||||||||| || ||||| ||||| || || || ||| Sbjct 10798 GATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCAA 10739 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || |||||||| | ||||| | || | || || || || Sbjct 10738 CAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAAT 10679 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||||||||| || || || || || ||| ||||| | | ||||| || ||| | | Sbjct 10678 ATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGGGAT-GCAA--ATT 10622 Query 27228 TTTGTAA 27234 ||||||| Sbjct 10621 TTTGTAA 10615 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || || ||||||||| | || || || |||| || | ||||||||| | || Sbjct 11999 CATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTC 11940 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | || || ||| ||||||||||| |||||||| || || ||||| Sbjct 11939 TGATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 11880 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||||| || ||| ||||||| | || | || || || || Sbjct 11879 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAA 11820 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || || || || || |||||| | |||||||| || Sbjct 11819 TATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTACGGGGTGGAAT 11769 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| ||||| |||| ||||| |||||||| | ||||| ||| | || Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||| ||||||||||| |||||||| || || |||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 10283 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || | | || | ||||| || ||| ||||||| Sbjct 10282 CAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGA 10248 Score = 87.8 bits (96), Expect = 2e-12 Identities = 169/247 (68%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || ||||| || ||||| |||||| |||| ||| | ||||| || || || Sbjct 11770 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCT 11711 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||| || ||||| || || || || ||||| Sbjct 11710 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 11651 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || || || || | ||||| | || | || ||||||||| Sbjct 11650 CAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAAC 11591 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAACACT 27227 ||||| || || || || || || | || | || || | ||||| || |||| | Sbjct 11590 ATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGAAT-GCAAATA-- 11534 Query 27228 TTTGTAA 27234 ||||||| Sbjct 11533 TTTGTAA 11527 >seq19342 Length=14378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || | ||||| || || ||||| | || Sbjct 4266 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCT 4207 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || ||| ||||| ||||| || ||||| || ||||| || || Sbjct 4206 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 4147 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | || || |||||| | ||||| | || | || || |||||| Sbjct 4146 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAAC 4087 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||||||||| || || || ||| Sbjct 4086 ATTCAAAAGGAATCCACATTGCAT 4063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434026654185600