Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq83080 111 1e-19 seq99457 100 2e-16 seq20122 91.5 1e-13 >seq83080 Length=6998 Score = 111 bits (122), Expect = 1e-19 Identities = 228/330 (69%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 14715 AATTTGATAGCTACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGA 14774 ||||||| | ||||| |||||| | |||| | |||||||| | |||| | | Sbjct 2883 AATTTGACAAATACAATGATTACATTCTGGCTTTAAATTATTTTGATGCAAAGGCTATTA 2942 Query 14775 ACTACAACAGCGGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTG 14832 | ||||||| ||||||||||| ||||| |||||||| || |||| | || ||| | || Sbjct 2943 AATACAACAAGGGTTTGTTTTATTATGTACTGTGGAATATATGTG-ATCG-TAAAGAATG 3000 Query 14833 GATGAACCAAAATGTGCTTGACCAATT--TTGGAAATACGTTAAACTTCGCTTACAAAAC 14890 |||| ||| |||||| |||| |||| | | ||| ||||| | |||| || Sbjct 3001 GATGGACCGAAATGTTGTTGAAAAATTCAAAGAATATATGTTAAGGCGTG-TTACCGAA- 3058 Query 14891 ACTACATGCAAGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTA 14950 || | |||| | | ||||| | || |||||| |||| || || | || |||||| Sbjct 3059 ACAAAATGCTATATTGGTCTGACCTCCCTTCCTTTGGATCCCTTAATACAGACGTCACTA 3118 Query 14951 CTAACAGCCCTGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTA 15010 | |||| || ||||| ||||| || | || || | ||||||||| |||| | | Sbjct 3119 CCTGCAGCTCTCTGGTATTGTGTAGAAATTTCATCATATATATTTAAAGACGATGACGCA 3178 Query 15011 CATTACACCAATGAAAGACTGCGACTTTAT 15040 |||||| |||| ||||| ||| | |||| Sbjct 3179 CATTACTCCAAAGAAAGGTTGCAAAATTAT 3208 >seq99457 Length=1879 Score = 100 bits (110), Expect = 2e-16 Identities = 221/320 (69%), Gaps = 10/320 (3%) Strand=Plus/Minus Query 14726 TACAACGATTACGTGGTGGCGGCGACATATTTTGACGGAAAGAAGGTGAACTACAACAGC 14785 ||||| |||||| | |||| | |||||||| |||| | || ||||||| Sbjct 1876 TACAATGATTACATTCTGGCTTTAAATTATTTTGATTCAAAGGCTATTAAATACAACAAG 1817 Query 14786 GGTTTGTTTTACTATGTTCTGTGGAA-AT-TGTGCAGCGCCAAAAAGTGGATGAACCAAA 14843 ||||||||||| ||||| |||||||| || |||| | || || || |||||| ||| || Sbjct 1816 GGTTTGTTTTATTATGTACTGTGGAAGATATGTG-ATCGTAAAGAA-TGGATGGACCGAA 1759 Query 14844 ATGTGCTTGACCAATTTTG-GAA-ATACGTTAA-ACTTCGCTTACAAAACACTACATGCA 14900 |||| | || |||| ||| ||| ||||| || | | | | ||||| | |||| Sbjct 1758 ATGTTGTAGAAAAATTCAAAGAATATATGTTAAGACGT-GTTGCCGAAACA--AAATGCT 1702 Query 14901 AGCTAGGTCTTTCGTCGCTTCCTATGGACCCGCCCATGAAAACATCACTACTAACAGCCC 14960 | | ||| | | || |||||| |||| || || |||| ||||| | |||| | Sbjct 1701 ATATTGGTTTGTGCTCACTTCCTTTGGATCCCTTAATACAAACGTCACTGCCTGCAGCTC 1642 Query 14961 TGTGGTACTGTGTTGAGTTGTCGTCCGACATATTTAAACACGACCAATTACATTACACCA 15020 | ||||| ||||| || | || || ||||||||||| |||| | |||||| ||| Sbjct 1641 TCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGCGCATTACTCCA 1582 Query 15021 ATGAAAGACTGCGACTTTAT 15040 | |||||| ||| | |||| Sbjct 1581 AAGAAAGATTGCAAAATTAT 1562 >seq20122 Length=23100 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| |||||||| || | || || ||| | || || ||||||||||| ||||| Sbjct 10668 TCCTTTTGAATATTATAGTCAGACAGAGTGCGTCCATCTTCTAGCTGTTTGCCAGCAAAA 10727 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTG-TTTGAGCGT 39212 || || | ||| ||||| | || | || |||||| ||| ||| ||| || || | | Sbjct 10728 ATCAGCCTCTGTTGGTCTGGAGGAATGCCCTCTTTATCC-TGAATTTTTGCCTTAACATT 10786 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| | ||||| |||| |||||| |||| || ||||| || || || Sbjct 10787 TTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTAC 10846 Query 39273 AAAGATTTGCAT 39284 ||| |||||||| Sbjct 10847 AAAAATTTGCAT 10858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428686888679390