Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq22953 131 1e-25 seq20122 120 2e-22 seq46845 82.4 5e-11 >seq22953 Length=36863 Score = 131 bits (144), Expect = 1e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || ||||| || ||||| ||||| || ||| | |||||||| | Sbjct 14456 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 14397 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| |||||| ||||| |||||| ||||| ||||| | || |||||| Sbjct 14396 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 14337 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||||| || || || || || ||| | ||||||| ||||||| | ||| || Sbjct 14336 CAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTAT 14277 Query 23788 AACATACAAAAAGAGTCCAC 23807 || || |||||||| || || Sbjct 14276 AATATTCAAAAAGAATCTAC 14257 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || || || || ||||| ||||| | |||||||| || | Sbjct 13085 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 13026 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | ||||| | || | | |||||||| ||| | || |||||||| Sbjct 13025 GACACTATTGAAAATGTTAAAGCCAAGA-TCCAAGACAAAGAGGGTATTCCCCCAGATCA 12967 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || ||||| || ||||| || | || ||| | || ||||| Sbjct 12966 ACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAA 12907 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||||||||| || || || || ||| | || |||||||| Sbjct 12906 TATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 12859 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || ||||| || || || |||||||| |||||| | || || || | | Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| | |||| | || ||| || |||||||| ||| | || |||||||| Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || ||||| || |||||||||||||| | || || ||| ||||| || Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 14047 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||| || || || |||||||||| || Sbjct 14046 TATTCAAAAGGAATCTACCCTACATTTAGTATT 14014 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || || || || || || || ||||| ||||| || | | Sbjct 13769 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAAGTGGAGCCATCT 13710 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| || ||| || ||||| ||| | || ||||||||| Sbjct 13709 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 13650 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| |||||||| || ||||| | ||||| | || |||||| Sbjct 13649 CAACGTCTTATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 13590 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||||||||| || | |||||||| | | ||||||| || Sbjct 13589 ATCCAAAAAGAGTCTACTCTTCATTTAGTACTGCGTCTGCGAGGTGG 13543 Score = 109 bits (120), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| || || |||||||| || ||| | |||||||| | | Sbjct 13314 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 13255 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||||| | ||||| | || | || || || ||||| | || ||||||| Sbjct 13254 AGACACCATTGAAAATGTTAAAGCCAAGA-TTCAAGATAAGGAAGGAATTCCTCCAGATC 13196 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| ||| | || || || || || ||||||||||| | ||||| | || |||| Sbjct 13195 AACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACA 13136 Query 23789 ACATACAAAAAGAGTCCAC 23807 | || || ||||||||||| Sbjct 13135 ATATCCAGAAAGAGTCCAC 13117 >seq20122 Length=23100 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| || ||||| |||||||| | | Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||||| | ||||| |||||| || || || || || | || ||||| || Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAA-TTCAAGATAAGGAGGGGATTCCTCCAGACCA 10512 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || || || |||||||| ||||| | |||||| | || ||||| Sbjct 10511 ACAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAA 10452 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || || || ||||||||||| Sbjct 10451 CATTCAGAAGGAATCTACTTTACATTTAGT 10422 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| || || || || || || || |||||| | |||||||| | | Sbjct 11771 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 11712 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||||| | ||||| | |||| || || ||||| || | || ||||||| Sbjct 11711 TGATACAATTGAAAATGTTAAAGCGAAAA-TTCAGGATAAAGAGGGAATTCCCCCAGATC 11653 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || | | || ||||| || || || || ||||| | |||||| || ||||||| Sbjct 11652 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACA 11593 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| || ||||| || || || || |||| || || || |||| ||| Sbjct 11592 ACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 11543 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| ||||| || || || || || || ||||| |||||| | ||||| || | | Sbjct 11087 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 11028 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || | |||| | ||||| | |||| || ||||| |||||| | || ||||||| Sbjct 11027 TGATACAATAGAAAATGTTAAAGCTAAAA-TTCAAGACAAGGAAGGTATTCCTCCAGATC 10969 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || || || || || ||||||||||| | ||||| || || || | Sbjct 10968 AACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTATA 10909 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 | || || || ||||| || || |||||||| || Sbjct 10908 ATATCCAGAAGGAGTCTACTTTGCATTTAGTCTT 10875 Score = 95.1 bits (104), Expect = 8e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || ||||| || || || || || ||||| || |||||||| || | Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||||| | |||| | |||| || || || ||||| | || ||||| | Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAA-TTCAAGATAAGGAAGGAATTCCTCCAGACC 11425 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | || ||||| || || || || ||||| | ||| || | || |||| Sbjct 11424 AACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACA 11365 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819 | || || || || || || ||||||||||| Sbjct 11364 ATATTCAGAAGGAATCTACTTTACATTTAGT 11334 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| || || || ||||| || || | ||||| || | | Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | |||| | |||| |||| | || ||||||||||| | || || ||||| Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGA-TTCAGGACAAAGAAGGCATTCCTCCTGATCA 11196 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || || || || || ||||||||||| | ||||| || || || || Sbjct 11195 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 11136 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || || ||||| || || |||||||| || Sbjct 11135 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTT 11103 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || ||||| | || || ||||| || ||| | ||||| || | | Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| | |||| |||| | || ||||| ||||| | || |||||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGA-TTCAAGACAAGGAAGGCATTCCTCCAGATCA 10284 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| || ||||||||||| | ||||| || || || || Sbjct 10283 ACAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAA 10224 Query 23790 CATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 10223 TATCCAGAAAGAATCTAC 10206 >seq46845 Length=681 Score = 82.4 bits (90), Expect = 5e-11 Identities = 167/243 (69%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 23573 ATTTTCTTATAAGAGCGAATGACAATTAATTACTTAAAATGCAGATTTTCGTTAAAACCC 23632 |||| ||||||| | |||| ||||| | ||||||||||||||||| ||| ||| Sbjct 596 ATTTGCTTATAATATTTTATGAAAATTACAGATCAAAAATGCAGATTTTCGTAAAATCCC 537 Query 23633 TCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAA-ATATTAAAA 23691 ||||||| ||| | | |||| ||||| |||| ||||||| ||| || | || Sbjct 536 TCACGGG--CCACGTTGTC-CTCGCTGTTGAACCCACTAACACTGTAGAACATGTGAAGT 480 Query 23692 CAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGC 23751 | |||| || | || | ||||| | | | || | || | |||||||||| ||| Sbjct 479 CTAAAATTTAC-GAAAGGGAAGGCATCTCTCATGAATATCAAAGATTAATATTTGAAGGC 421 Query 23752 AAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTA 23811 |||||||| | || | | | ||| || || || ||||| || || || || || ||| Sbjct 420 AAACAACTAAATGATGGAAGAACTCTATCTGAATATAACATTCATAATGAATCGACTTTA 361 Query 23812 CAT 23814 ||| Sbjct 360 CAT 358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337333879727240