Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5945 610 9e-170 seq13889 100 4e-16 seq46256 95.1 2e-14 seq112584 87.8 2e-12 >seq5945 Length=4136 Score = 610 bits (676), Expect = 9e-170 Identities = 1041/1497 (70%), Gaps = 17/1497 (1%) Strand=Plus/Plus Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821 |||||||| || || | ||||||||||| | | | ||| |||||||| |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881 ||||||| || ||||||| ||||| |||| ||| |||||| || || ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941 ||| |||| | || | ||| || || | || |||||||| || || |||||||||| Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001 ||||||| ||||| | ||| || ||| | | ||| ||||| | |||||| | | | Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058 | | || || | |||| ||| | ||| | || || ||| | ||||||| Sbjct 1517 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 1576 Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 || || ||||| |||| |||||| | | || ||| | | || |||||| | | Sbjct 1577 GGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 1636 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | |||| ||||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 1637 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 1696 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | || Sbjct 1697 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 1756 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 ||| | ||| | | ||||||| || || || ||||| || ||| ||||||| Sbjct 1757 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 1816 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | |||| ||| ||||| | ||| || || || || || | || || | || Sbjct 1817 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 1875 Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 | || |||||| || | |||||| ||||||||| ||||||||| ||||| ||||| Sbjct 1876 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 1935 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 || |||||||||||||| || || | | ||||||| | ||||| ||| || | Sbjct 1936 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 1995 Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536 | ||| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| Sbjct 1996 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 2054 Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596 ||||||| |||| ||| |||| ||||| || | ||||||| |||||| || |||| ||| Sbjct 2055 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 2114 Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656 || | |||| | || | || | || |||| ||| ||||| |||||| Sbjct 2115 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTT 2174 Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716 || | |||||||||||| | ||||| || || || || || ||||| || |||| | Sbjct 2175 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 2234 Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 | ||||| | | ||| || || ||||| |||||||| |||||||| ||||||| Sbjct 2235 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 2294 Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836 ||| || |||||| | || || | |||||||| | || | || || || || || | Sbjct 2295 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCAC 2354 Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || || Sbjct 2355 TTGGGCTTCTATAATCGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 2410 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951 | | ||| |||||||| |||||||| ||||||||| ||||| || || ||| | Sbjct 2411 GTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGCG 2469 Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011 | ||||| || |||| || ||||| | ||| | |||| | | |||| |||| Sbjct 2470 AGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 2529 Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071 ||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| || Sbjct 2530 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 2589 Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 ||||| ||||| || | ||| | || || | || || | |||||| || |||| ||| Sbjct 2590 CCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATAA 2649 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 ||||| | | || || ||||| || || || ||||||| ||||||||| || || ||| Sbjct 2650 ATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 2709 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 || |||||||||||||| | | ||| || || ||||| || |||| || ||| Sbjct 2710 TACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 2766 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601 |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 3406 CTTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 3465 Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652 | ||| ||||| || |||| ||| |||| | || ||| || |||| ||| Sbjct 3466 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq13889 Length=23247 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | | Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||||||| |||||||||||||| ||||| || Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441 >seq46256 Length=4484 Score = 95.1 bits (104), Expect = 2e-14 Identities = 244/370 (66%), Gaps = 9/370 (2%) Strand=Plus/Plus Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026 |||||| ||| || || |||||||| ||| | || | || ||| | | ||| | | Sbjct 1328 TTATGACTCCAGTATTACCAATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTATGA 1387 Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086 |||||| |||| ||| |||||| | || ||||||||||||| ||||| || ||||| | Sbjct 1388 AAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 1447 Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146 ||||||| ||| | || | ||| | | | | ||||| || | | || | Sbjct 1448 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCACA 1507 Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATT---TAAAAAAGCTACCTCTATTA 171203 ||||| | || | || || || | ||||||||||| |||| || | || | | Sbjct 1508 AAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGATGACT---TGA 1564 Query 171204 TCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAA 171260 | |||||| | ||| | || | ||||||| ||| || ||| | || || || | Sbjct 1565 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 1624 Query 171261 GTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTG 171320 | |||| || |||||| | ||| | ||| ||||| | | || || | | |||| Sbjct 1625 CTTTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 1684 Query 171321 ATTGTTTATA 171330 |||| ||||| Sbjct 1685 ATTGCTTATA 1694 >seq112584 Length=656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/220 (70%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||| ||| ||| | ||| || || || | |||||||| || || |||||||| Sbjct 61 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 120 Query 48225 AGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 | ||||||||||| || |||| | || || || ||||| || || || || ||||| || Sbjct 121 AACCAAAATATTGAAGC-AAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGC 179 Query 48284 GGTAAGTCTCTCTCC----GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAG 48339 | | | ||||| ||| | | ||| | || |||||| || ||||| || | Sbjct 180 AATTATACGTTCTCCAAATGTAGCCGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTG 238 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 |||||||||| ||||| || | ||||| || ||||| || Sbjct 239 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAA 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693244468459200