Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5945 598 6e-166 seq13889 91.5 2e-13 seq69558 84.2 3e-11 >seq5945 Length=4136 Score = 598 bits (662), Expect = 6e-166 Identities = 1118/1627 (69%), Gaps = 19/1627 (1%) Strand=Plus/Plus Query 75357 TTATTTTATTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGAT 75416 |||||||| || || | || |||||||| | | | |||||||||||| |||| | Sbjct 1277 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 1336 Query 75417 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG 75476 ||||||| || ||||||| ||||| |||| ||| |||||| || || ||||| Sbjct 1337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 1396 Query 75477 AATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 75536 ||| | || | || | ||| || || | || |||||||| || || |||||||||| Sbjct 1397 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 1456 Query 75537 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 75596 ||||||| ||||| | ||| || ||| | | ||| ||||| | |||||| | | | Sbjct 1457 TATCAGCTGCCATCTGTATGGATGTTTTTAGTGAAATCTCCCATACGGTTTTGTACAAAT 1516 Query 75597 GTTTGATATCATCTGGAAGATTTGTATTTT---GAATGGATCCGCCATCAGATATAATTG 75653 | | || || | |||| ||| | ||| | || ||||| | ||||||| Sbjct 1517 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 1576 Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713 || || || || |||| |||||| | | || ||| | | || |||||| | | Sbjct 1577 GGTTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 1636 Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773 | || | ||||||||||||| || ||||||| ||||||||| ||| | |||| Sbjct 1637 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 1696 Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | | ||||||| |||| || | |||||| ||||| || |||||||||||||| || | || Sbjct 1697 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 1756 Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893 ||| | ||| | | ||||||| || || || ||||| || ||| ||||||| Sbjct 1757 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 1816 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | |||| || ||||| | ||| || || || || || | ||| || | || Sbjct 1817 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 1875 Query 75954 CATT-ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCA 76012 | || |||||| ||| | || || |||||||||| ||| ||||| || ||||| ||| Sbjct 1876 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 1935 Query 76013 CCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAA 76072 || |||||||||||||| || || | | ||| ||| | |||| ||| || || Sbjct 1936 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 1995 Query 76073 GGATAATGTAAAAGA-ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131 | ||| | | | | | ||| |||||||| | |||||||| ||||||||||||||||| Sbjct 1996 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 2054 Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191 ||||||| |||| ||| ||| ||||| || | ||| ||| |||||| ||| |||| ||| Sbjct 2055 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 2114 Query 76192 ATTGAGATTTCTGACA-ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTC 76250 || | |||| ||| || | || | || |||| ||| ||||| |||| | Sbjct 2115 GTTTAAATTT-TGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGT 2173 Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310 || | |||||||| ||||| ||||| || || || || || || || || |||| Sbjct 2174 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTT 2233 Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370 | | ||||| | | ||| ||||| ||||| ||||| || ||||| |||||||||| Sbjct 2234 CTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTT 2293 Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430 ||| || |||||| ||||||| | |||||||| | | | || || ||||| || | Sbjct 2294 TTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCA 2353 Query 76431 TCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTA--T 76486 || | ||| ||||| || ||||| | ||||| |||| | | | | ||| || | Sbjct 2354 CTTGGGCTTCTATAATCGACTTCCATA--ACTCTTGAGCTCTGACTT--GTTTTATAAAT 2409 Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACA-TCATC 76545 || || ||| |||||||| ||||||| ||||||||| ||||| || || ||| | Sbjct 2410 CGTTTTTCTTCTTCATATTTGGTATATAGTTCTTCAAATTCCTCTCCA-AAGCAGTCAGC 2468 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 | |||||||| |||| |||||||| | ||| | |||| | | || | ||| Sbjct 2469 GAGGCCAGGACAGTCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTT 2528 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| || Sbjct 2529 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 2588 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 ||||| ||||| || | ||| | ||| || | || || | |||||| || |||| ||| Sbjct 2589 ACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCCGCATGCCAAGGCTCTAAATA 2648 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | | || || ||||| || || || ||||||| |||||||||||| || || Sbjct 2649 AATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTT 2708 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 ||| |||||||||||||| | | || || || ||||| || |||| || ||| Sbjct 2709 ATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGA 2768 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 || || | || | || || ||||| || || || |||||| |||| Sbjct 2769 ACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAA 2828 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 ||||| |||| || || ||| | || || || || ||||| || |||| | ||| Sbjct 2829 TGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAG 2888 Query 76966 AAAACAG 76972 |||||| Sbjct 2889 GAAACAG 2895 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 77137 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 77196 |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct 3406 CTTATTTTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 3465 Query 77197 TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTT 77247 | ||| ||||| || |||| ||| | || | || ||||||||| | ||| Sbjct 3466 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 3516 >seq13889 Length=23247 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175 || |||| ||||||||||| || ||||| || || || || |||||||||||||| | | Sbjct 22535 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 22476 Query 47176 CATATATCACGATATTGGATCGGAAAAATAACAAA 47210 |||||||| |||||||||| || || ||||| || Sbjct 22475 CATATATCTGGATATTGGATTGGGAATATAACGAA 22441 >seq69558 Length=3257 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 169535 TTATGACTCC--TATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATT 169592 |||||||||| ||| | || ||||| || ||| | ||| | || ||| | | ||| | Sbjct 735 TTATGACTCCAGTATTA--CCGATGTTAGCTGAAGCTTGCAAGTCAGTTGAAATGGCTAT 792 Query 169593 TAAAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGT 169652 ||||||| |||| ||| |||||| | || | ||||||||||| ||||| || ||||| Sbjct 793 GAAAAAATGTCCAAATGGTATGTTTTCTGAGATAAAATATGACGGAGAACGGGTTCAAGT 852 Query 169653 TCATAAAAA 169661 |||||||| Sbjct 853 CCATAAAAA 861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711472617129600