Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq22953 131 1e-25 seq66326 129 5e-25 seq20122 113 4e-20 >seq22953 Length=36863 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 |||||||| || ||||| ||||| | || || ||||||||||| ||||| ||||| Sbjct 14456 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 14397 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 |||| || ||| | |||||| |||||| ||||| |||||| |||| ||| Sbjct 14396 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 14337 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||| | | |||| || || || ||||| ||||| ||| | |||| ||| Sbjct 14336 CAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGACTAT 14277 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| |||||||||||||| || || || || |||||||| || ||||| Sbjct 14276 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 14227 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||||||||| ||||| || || ||||||||| ||||| ||||| Sbjct 13541 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 13482 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || ||| ||||| || || || ||| | ||| || ||| Sbjct 13481 GACACAATTGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 13422 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | || |||| ||| || |||||||||||||| | ||| || | ||||| ||| Sbjct 13421 CAGCGTCTCATTTTTGCTGGAAAACAATTGGAAGACGGTCGCACTTTGTCTGATTACAAT 13362 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| || || || || |||||| | ||||| || ||||| Sbjct 13361 ATTCAGAAAGAGTCAACCCTGCACTTAGTGCTTCGTCTCCGTGGTGG 13315 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || ||||| || || | || || |||||||| || | || ||||| Sbjct 14226 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTC 14167 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| || | | | || || ||| || |||||||| || ||||| ||||| Sbjct 14166 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 14107 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTAT 111276 ||| ||||| |||| ||| || |||||| |||||||| | | | ||| | |||||| Sbjct 14106 ACAGAGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTAT--CTGATTAT 14049 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| ||||| |||||||| ||||||||||| ||||| || || || || Sbjct 14048 AATATTCAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCGTGGCGG 13999 >seq66326 Length=6876 Score = 129 bits (142), Expect = 5e-25 Identities = 202/289 (70%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 104975 ATGCCCGGCCCTATACACCCTAAATACGGCTCCGAGTCTGCACGTTTAAAAACTTTTGAG 105034 ||||||||||| | ||| | |||| ||||||| | || || | | || Sbjct 5527 ATGCCCGGCCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCCTGCGCAGCTTCAGC 5468 Query 105035 GATTGGCCACTTAGTTTAAAACAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTACTAC 105094 || ||||| | ||| | || || | ||| ||| || | |||||||| || || | |||| Sbjct 5467 GACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCTAC 5408 Query 105095 ACCGGCAAAGGTGATAAAGTCAAATGTTTTTATTGCGACGGCGGCCTTAAGGATTGGGCA 105154 |||||| | ||||| ||| || || || || || |||||||| || ||||| |||| Sbjct 5407 ACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGGAG 5348 Query 105155 AACGCCGACGAACCGTGGGAGGAACATGCACGTTGGTTTGATCGCTGTTCGTTCGTAAAA 105214 |||| ||||| ||||||||| | || || || ||||| || || || | | ||| | Sbjct 5347 AACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGCAG 5288 Query 105215 CTGGTCAAAGGACACGACTACGTGCAGCGGGTGATTAGCGAAGCATGCG 105263 ||||||||||| | || ||||| ||| |||||| | || || |||| Sbjct 5287 CTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCGTGCG 5239 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 104735 AACGGGTTCTACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAA 104794 || || ||||| ||| |||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 5770 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 5711 Query 104795 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAG 104854 || ||| ||| | | ||| ||||| || ||| || || | || |||||||| ||| Sbjct 5710 ATTATGAAATGGGTTGCGGGTGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 5651 Query 104855 TGCCCGTTTTTGCG 104868 ||||| || |||| Sbjct 5650 TGCCCCTTCCTGCG 5637 >seq20122 Length=23100 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| |||| |||||||| |||||| | ||| |||| | Sbjct 11314 ATGCAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCT 11255 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | | | | || || ||| ||| |||||||||||| |||| |||||| Sbjct 11254 GACACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAA 11195 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| || || || ||| |||||||| || || | || |||||| Sbjct 11194 CAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 11135 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || ||||| | |||||||| |||||||| | ||||| Sbjct 11134 ATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 11088 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| ||||| |||||||| ||||| ||||| ||| | Sbjct 10402 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACTTTGGAAGTAGAAGCTTCT 10343 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || | | | || || ||| ||| ||||| |||||| |||| |||||| Sbjct 10342 GATACTATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 10283 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| ||| || || ||| |||||||| || || | || |||||| Sbjct 10282 CAAAGACTGATTTTTGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAAT 10223 Query 111280 ATACAAAAAGAATCTACACTACA 111302 || || ||||||||||| || || Sbjct 10222 ATCCAGAAAGAATCTACCCTTCA 10200 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || |||| || ||||| || || ||||| |||| | Sbjct 10859 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 10800 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | ||| | || || ||||||| || ||||| ||| |||| || || Sbjct 10799 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCA 10740 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| ||||| |||| ||| |||||||| | |||||| ||| || | || ||||| Sbjct 10739 ACAGAGGCTGATTTTTGCTGGCAAACAGCTAGAAGATGGACGCACTCTGTCTGACTATAA 10680 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| ||||| |||||||| | || ||||| ||||||| | ||||| Sbjct 10679 TATTCAAAAGGAATCTACTTTGCACTTAGTTCTGCGTCTAAGAGGTGG 10632 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || || ||||| || || || ||||| || || ||||| |||| | Sbjct 11998 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCT 11939 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | | | | ||||| ||| ||| ||||| |||||| |||| |||||| Sbjct 11938 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 11879 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| || |||| || || || ||| |||||||| || || | || |||||| Sbjct 11878 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAAT 11819 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| | || |||||||||||||| || ||||| Sbjct 11818 ATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTACGGGGTGG 11772 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||||||||| || || |||| || ||||| || || ||||| |||| | Sbjct 11087 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTC 11028 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || ||| |||||| ||||| ||||| |||| ||||| Sbjct 11027 TGATACAATAGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCA 10968 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||| || |||| || || || ||| |||||||| | || || | || ||||| Sbjct 10967 ACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGTCGCACATTGTCAGACTATAA 10908 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || || ||||| | |||||||| |||||||| | ||||| Sbjct 10907 TATCCAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGAGGTGG 10860 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 ||||||||| ||||| ||||| |||| ||||| || || || ||||| || ||| Sbjct 11543 AATGCAAATATTTGTAAAAACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 11484 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 || | ||| | || || |||||| || || ||||| |||| || || Sbjct 11483 TGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGACCA 11424 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 |||||||||||||| ||| || || || | |||||| || || | || || || Sbjct 11423 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGTACACTGTCTGACTACAA 11364 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||| || || |||||||| |||||||||| | |||||| | ||||| Sbjct 11363 TATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 11316 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| ||||| | || || ||||| ||||| | ||| || || Sbjct 10630 ATGCAAATTTTTGTAAAAACACTTACTGGTAAAACTATTACTCTTGAAGTTGAGCCTTCT 10571 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || ||| ||||||| || || || || |||| || ||| Sbjct 10570 GACACAATTGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGGATTCCTCCAGACCAA 10511 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||||| || || |||||| | |||||| || || | || || || Sbjct 10510 CAGAGGCTTATTTTCGCTGGAAAACAACTTGAAGATGGACGCACACTGTCAGACTACAAC 10451 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| |||||||||| | |||||| | ||||| Sbjct 10450 ATTCAGAAGGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 10404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420967950639280