Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq13889 138 1e-27 seq164006 116 4e-21 seq163986 114 1e-20 seq112584 91.5 2e-13 >seq13889 Length=23247 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 22902 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 22843 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 |||| ||||| || || || ||||||| || |||||| || | | || | | | | Sbjct 22842 GAAATCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACCA 22783 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || ||||||||||||||| ||| |||||||| || | |||| || ||||||| Sbjct 22782 AGTTCTCATTAACAATACCATCAGAAGCTGCAAAGAATGCTAAGACATGCTTGATAAAAT 22723 Query 23957 GTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 || | ||| | | |||| | | |||||| Sbjct 22722 GTTTCTCACAATCTTTTAATGTCTCCCAATC 22692 >seq164006 Length=203 Score = 116 bits (128), Expect = 4e-21 Identities = 114/146 (78%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||||||| ||||| || ||||||| ||| |||||||||| |||| |||| Sbjct 173 CTCTGTTGCCTAGGCTAAAGCACAGTGGCACAATCATAGCTCACTGCAGCCTCAACCTCT 114 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCC 8468 ||| |||||| || |||| ||||| ||||| ||||||||||| | |||||| | ||| Sbjct 113 -GGGCTCAAGCGATCCTCCCACCTCAACCTCCTGAGTAGCTGGGGCTGCAGGCACATGCC 55 Query 8469 ACCACGCCAAGCTAATTTTTGTATTT 8494 |||| ||| ||||||||||| | ||| Sbjct 54 ACCATGCCCAGCTAATTTTTTTTTTT 29 >seq163986 Length=200 Score = 114 bits (126), Expect = 1e-20 Identities = 91/107 (85%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 8430 CCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTT- 8488 ||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||| Sbjct 200 CCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGTGTGCCACCATGCCTGGCTAATTTTTT 141 Query 8489 GTATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCTGGTCT 8535 ||||||| |||||||| |||||||||||||||||||| | ||| || Sbjct 140 GTATTTT-AGTAGAGATGGGGTTTCACCATGTTGGCCAAGATGGGCT 95 >seq112584 Length=656 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||||||| ||| | |||||| || || ||||| ||||| | ||||||||||| Sbjct 61 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 120 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||||||||||| |||||| || || || || || |||||||| || ||||| || Sbjct 121 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCTGCAAAAGCA 180 Query 23653 ACAAGACGTGTACCAAATGTTGC 23675 | | |||| |||||||| || Sbjct 181 ATTATACGTTCTCCAAATGTAGC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520418754042000