Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq20852 183 2e-41 seq22953 104 2e-17 seq19342 102 6e-17 seq20122 96.9 2e-15 >seq20852 Length=11699 Score = 183 bits (202), Expect = 2e-41 Identities = 770/1206 (64%), Gaps = 41/1206 (3%) Strand=Plus/Minus Query 5737 TTACCTA-ACCCTTGATTCATGGAGTTTAACAAGTCGCCGTTGTCCGCGTCGATTTCCCA 5795 ||||| | |||| || ||||||| || | | ||| ||||| || ||||| | |||||| Sbjct 3365 TTACCGAGACCCATG-TTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCA 3307 Query 5796 TCCAAATAGACCCCCCAGCCCCTTTTGGATGACATATTTTCCCTTGGCCGTCACGGACCT 5855 |||| ||||| || ||| || | | |||||||| ||||| | | ||||| || Sbjct 3306 AGCAAAGAGACCTCCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACGGATCT 3247 Query 5856 CTCGTCGTCGTAGGTGACGAGATCGTC-GTTG-TGGT----ACACGTAGGGCGCTTGCGC 5909 | | || ||||| || ||||| | |||| |||| | |||||||| ||||| || Sbjct 3246 AGCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAAACGTAGGGGGCTTGGGC 3187 Query 5910 CACTCCGTCGTAAT-----------TCGGGTTGGG--ATACCGGTTCGTGATGTCTTTGT 5956 || |||||||| | | ||| | || | |||| || || ||| Sbjct 3186 GACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCAATTTCA-TTCGCAATCTCCCTGT 3128 Query 5957 AGTCCACGACACCGTTTTCCCAGGAACCCTTTACGGGACCCGTGGCAGTGCCTGTGAAGG 6016 |||| || || |||| || ||| | || || || || || || || |||||||||||| Sbjct 3127 AGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGG 3068 Query 6017 GATTGTTGTTGGTGATGTTGTGGATTCCACGCCATCCCCTGCCGTACATGGCCACGCCCA 6076 || |||||| || | || | ||| ||| || | || ||||| || || || | Sbjct 3067 GAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTA 3008 Query 6077 CCACCAATTTGTTTGGGTTCACGCTCTGATTGAGCAGGCGTTGGACGGCGAACGCGGTGG 6136 | || | || || || ||||| | ||| |||| | || || |||| | | | Sbjct 3007 CTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATG 2948 Query 6137 TGTACTTTTCGGTGGGGTTCCATGTGGGCGCGTACAGGGGCGTCTGCAGTCCCAGATCGG 6196 |||| |||| |||| ||||| | |||||||||| ||||| || |||| ||| Sbjct 2947 TGTAAGTTTCCTTGGGATTCCACGCAGGCGCGTACAATGGCGTTTGATGTCCAAGAGTAT 2888 Query 6197 TGTTAGACCAGGCTCCCTTGAAATCGTACGTCATGACGAAAATATGATCCAGATACTCCT 6256 || ||||||||||||||||| ||||| |||| | |||||||||||||| ||| | | Sbjct 2887 CATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTT 2828 Query 6257 GCACCGCACCGTATTCTACAACGTTTATTTTGTCGTAGCCCCCGCTGATGGCGCTTGTGA 6316 | || ||||| || ||||| | ||||| || | || |||| || || || | Sbjct 2827 GAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTA 2768 Query 6317 GCAGATACTTGCGACCCGTGCGAGTCTCCAGACCGTCCAGCATGGACCTGAGGTCGCCCA 6376 || || ||| | || || | || ||||| | | || || Sbjct 2767 ATTCGTATTTCTTACCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCA 2708 Query 6377 AGAGCGCTTGATAGGTGACGCCGTCGACTGTGACGTTTCCTAAGGCAGGATTGGCTCCCT 6436 | | ||| | || || ||| | | || | | |||| || || || | Sbjct 2707 TCAAACTTACATAACAATCACCATCTTCTG---GGCTACCGAGGTCAGGGTTAGCACCTT 2651 Query 6437 TGCCTCCGGGAAATTCCCAATCTATGTCCACGCCGTCGAAGAACTTCCAAGTTTCCAGAA 6496 |||| || || || |||||||| || || || || |||||||| ||||| ||| || | Sbjct 2650 TGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGGA 2591 Query 6497 ATTCTTCGACGCTCTCTACGAACACCTTTCTTTTAATCGTGTCGTTGAGCTGGTAAAAGG 6556 | || | || || || || |||| ||| |||| | | | || | Sbjct 2590 ACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAG 2531 Query 6557 GATCGCTCAGCGTCCACCCACCGATCGAGGGCAGGATGGTCAGAT----GCGGATTGTGT 6612 ||||| |||||||||||||| || || || || || ||| | |||| | ||| Sbjct 2530 GATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCT-TGT 2472 Query 6613 TTTCGTATGGCCATAAGCTGACCGAAATTACCCTTGTA----CATTTCCGAGTAGGCCTC 6668 ||| || | ||| | || || || || || ||||| |||| | || | Sbjct 2471 TTTAGT---GACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGAC--- 2418 Query 6669 GACGCCCTTCTGGGGTTTTTGTAGTGCGCCCCATATATCGTGTATGGACACCTTGAAGTC 6728 | || || || |||||||||| ||| ||||| |||||| || || || || ||||| Sbjct 2417 -AATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTC 2359 Query 6729 GTCTCGTCCCTCGCACGATCGCTGCAGAGCTTCGAACGAGCCCGGCACCTGTTTCAGAGC 6788 || || || || || ||||| || |||| ||| ||| | || ||| | | Sbjct 2358 CTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACT 2299 Query 6789 GTCGTTGATACCATCCCCTCCGCACATGGGCACGAATCCGTACAGCAGATGTGTGAGATT 6848 || ||||| || || || ||||| || || | || ||||| |||| ||| || ||||| Sbjct 2298 ATCATTGATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATT 2239 Query 6849 GGGAATGGGGATTCTGTCGGCGGGAAACTGTCTGTCGTAAACACCCCACTCCACGAAGTA 6908 || || || || | || |||| || | || || |||||||| || |||||||| Sbjct 2238 AGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTA 2179 Query 6909 AGCTCC 6914 || || Sbjct 2178 GGCACC 2173 >seq22953 Length=36863 Score = 104 bits (114), Expect = 2e-17 Identities = 166/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | || || || ||||| || ||||||||||||||| Sbjct 13761 TATTTGCATACCACCTCGCAGACGCAGTACTAGATGAAGGGTCGACTCCTTTTGGATGTT 13820 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | || ||| | || |||| ||||| || |||||||| | ||||||||| Sbjct 13821 GTAGTCAGACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTG 13880 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||| | || | || || || || || || |||| || | || ||||| | Sbjct 13881 ATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGA 13940 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | ||||| || ||||| ||||| || || || ||||||||||| Sbjct 13941 AGCTTCAACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 13997 Score = 100 bits (110), Expect = 2e-16 Identities = 165/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| ||| || |||| ||| | || || | ||||| || ||| ||||||||||| Sbjct 13533 TATTTGCATACCACCTCGCAGACGCAGTACTAAATGAAGAGTAGACTCTTTTTGGATGTT 13592 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 ||| || | || ||| | || || ||||| || || |||||||| | ||| || || Sbjct 13593 GTAGTCAGACAGGGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATAAGACGTTGTTG 13652 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGC 44280 ||||| || | ||| || || || ||||| ||| | || | |||||||| | Sbjct 13653 ATCTGGGGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGA 13712 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| |||| || || ||||| || || || ||||| || || |||||||| Sbjct 13713 TGGCTCCACTTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 13769 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || ||||||||||| || || | || ||| | || |||| ||| || || |||||| Sbjct 12667 TCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAG 12726 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||| || |||| || | || ||||| || ||||| ||| | || Sbjct 12727 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 12786 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | | |||||||||| || || ||||| || || || ||||| ||| Sbjct 12787 TCGATAGTGTCAGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACG 12846 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 12847 AAGATCTGCAT 12857 >seq19342 Length=14378 Score = 102 bits (112), Expect = 6e-17 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| || | | | || | || || || || || || |||||| Sbjct 4076 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 4135 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| ||||| |||| || | ||||||||| || || || || | || Sbjct 4136 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 4195 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 |||| || || | || |||||||| | ||||| || || ||||| |||||||| ||| Sbjct 4196 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 4255 Query 44327 AAGATTTGCATGATGTGA 44344 || |||||||| ||||| Sbjct 4256 AAAATTTGCAT--TGTGA 4271 >seq20122 Length=23100 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| || | || | |||||| | ||| | || ||||| ||||| || || Sbjct 11765 TTGCATTCCACCCCGTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATATTATA 11824 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | ||| |||| | || ||||| ||||| ||||| || |||| | || ||||| Sbjct 11825 GTCTGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATC 11884 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | |||||||| || ||||| ||| | || | || || || | | Sbjct 11885 TGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGC 11944 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 |||||| |||| || || || || || || | || || |||||||||||||||||| Sbjct 11945 TTCCACTTCCAATGTGATAGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGATG 12002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| |||||||| | | || ||||| | || || || || ||||| Sbjct 11534 TATTTGCATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTT 11593 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | ||| ||| | || || |||||||| || ||||| || | | ||||| Sbjct 11594 GTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTG 11653 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGG 44279 ||||| || | || || || ||| || ||| |||| || || | || || || | Sbjct 11654 ATCTGGGGGAATTCCCTCTTTATCCTGAATTTTC-GCTTTAACATTTTCAATTGTATCAG 11712 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || |||| || || ||||| || || || ||||| ||||| |||||||| Sbjct 11713 AAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 11770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359270737566510