Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201
5-12-17] 164,030 sequences; 282,526,854 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq20122 143 6e-29
seq19342 138 3e-27
seq22953 123 6e-23
seq39065 98.7 2e-15
>seq20122
Length=23100
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| || || || ||||| || ||| | || |||||| || |||
Sbjct 11311 CAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTGAC 11252
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||||||||||||||||||| || ||||| || || |||
Sbjct 11251 ACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAACAA 11192
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||| ||||| || || |||||||| | || | | || ||||| ||
Sbjct 11191 AGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATC 11132
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || ||||| | || ||| | || |||
Sbjct 11131 CAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGA 11093
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || ||||| ||||| | || |||||| || ||
Sbjct 11995 CAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCTGAT 11936
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||| ||||| ||||| || ||||| || || |||
Sbjct 11935 ACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAA 11876
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||||||||| || || |||||||| | || || | || ||||| ||
Sbjct 11875 AGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAATATC 11816
Query 178104 CAAAAAGAATCAACACTGCA 178123
|| || ||||| || ||||
Sbjct 11815 CAGAAGGAATCTACTTTGCA 11796
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || ||||| | || || || || ||
Sbjct 11767 CAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGAT 11708
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || |||||||| ||||| ||||| || || || ||||||
Sbjct 11707 ACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAA 11648
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| || || ||||| ||||| ||||||||| | || || | ||||| ||| |
Sbjct 11647 AGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAACATT 11588
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||||| || |||| || ||
Sbjct 11587 CAGAAAGAATCTACTTTGCACCTAGT 11562
>seq19342
Length=14378
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || ||||| || |||||||||||||| ||| ||
Sbjct 4263 CAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCTGAT 4204
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || || || ||||| || || || |||||||||
Sbjct 4203 ACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAA 4144
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || ||||||||| | || | | || || ||| |
Sbjct 4143 CGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACATT 4084
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| ||| ||||||||||
Sbjct 4083 CAAAAGGAATCCACATTGCATCTTGT 4058
>seq22953
Length=36863
Score = 123 bits (136), Expect = 6e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| || || |||||||| || || | || || || ||||||
Sbjct 13310 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCAGAC 13251
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| |||||||| || || |||||||| ||||| || || |||
Sbjct 13250 ACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAACAA 13191
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || || || |||||||| | || || | || || || ||
Sbjct 13190 CGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAATATC 13131
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || || || ||||
Sbjct 13130 CAGAAAGAGTCCACCCTTCA-CTTG 13107
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || || ||||| | |||||||| || |||
Sbjct 12854 CAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCTGAC 12795
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| || ||||| || || || || || ||||| ||
Sbjct 12794 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 12735
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || |||||| | || ||||| | ||||| | || |||||| ||
Sbjct 12734 CGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAACATC 12675
Query 178104 CAAAAAGAATCAACACTGCAT 178124
||||||||||| || |||||
Sbjct 12674 CAAAAAGAATCTACTTTGCAT 12654
Score = 118 bits (130), Expect = 3e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| ||||||||||| ||||| | ||||| ||| || |||
Sbjct 14222 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCGAC 14163
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||| || |||||||| || || || || || || ||
Sbjct 14162 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 14103
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || |||||||| || |||||||| | || | | |||||||| |
Sbjct 14102 AGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 14043
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| ||||| || || ||| | || |||
Sbjct 14042 CAAAAGGAATCTACCCTACATTTAGTATTG 14013
Score = 114 bits (126), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || |||||||| || || || ||||| || || | || || |||
Sbjct 14456 AAAATGC---AGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 14400
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || ||| || ||||| ||||| ||||| || |||||
Sbjct 14399 CCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCA 14340
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||||| | || ||||| ||||| || | ||||| ||| | |||||| ||||
Sbjct 14339 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGAC 14280
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
||||| | ||||||||||| || || || ||||
Sbjct 14279 TATAATATTCAAAAAGAATCTACTCTTCA-CTTG 14247
>seq39065
Length=2902
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| ||||| || ||| |||
Sbjct 2631 CAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAC 2690
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| |||||||| ||||| ||||| || |||||||| || || || || ||||||||
Sbjct 2691 ACTATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGGATTCCCCCAGACCAGCA 2749
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201201397131820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |