Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq20122 143 6e-29 seq19342 138 3e-27 seq22953 123 6e-23 seq39065 98.7 2e-15 >seq20122 Length=23100 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| |||||||| || || || ||||| || ||| | || |||||| || ||| Sbjct 11311 CAAATTTTTGTGAAAACACTGACTGGCAAAACTATTACCTTAGAAGTGGAAGCTTCTGAC 11252 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||||||||| || ||||| || || ||| Sbjct 11251 ACAATCGAAAATGTTAAGGCAAAGATTCAGGACAAAGAAGGCATTCCTCCTGATCAACAA 11192 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || ||||| ||||| || || |||||||| | || | | || ||||| || Sbjct 11191 AGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATC 11132 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || || || || ||||| | || ||| | || ||| Sbjct 11131 CAGAAGGAGTCTACTTTGCATTTAGTCTTGCGTCTAAGA 11093 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| |||||| | || || ||||| ||||| | || |||||| || || Sbjct 11995 CAAATCTTCGTAAAAACTTTAACTGGGAAAACTATCACATTGGAAGTGGAAGCTTCTGAT 11936 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || ||||||||| ||||| ||||| || ||||| || || ||| Sbjct 11935 ACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAACAA 11876 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || ||||||||||| || || |||||||| | || || | || ||||| || Sbjct 11875 AGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCAGACTATAATATC 11816 Query 178104 CAAAAAGAATCAACACTGCA 178123 || || ||||| || |||| Sbjct 11815 CAGAAGGAATCTACTTTGCA 11796 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || ||||| | || || || || || Sbjct 11767 CAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGAT 11708 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || |||||||| ||||| ||||| || || || |||||| Sbjct 11707 ACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAA 11648 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || || ||||| ||||| ||||||||| | || || | ||||| ||| | Sbjct 11647 AGACTTATTTTTGCTGGAAAGCAGCTAGAAGATGGACGCACACTATCTGATTACAACATT 11588 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || |||||||| || |||| || || Sbjct 11587 CAGAAAGAATCTACTTTGCACCTAGT 11562 >seq19342 Length=14378 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || ||||| || |||||||||||||| ||| || Sbjct 4263 CAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCTGAT 4204 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || || || || || ||||| || || || ||||||||| Sbjct 4203 ACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAA 4144 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| || ||||||||| | || | | || || ||| | Sbjct 4143 CGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACATT 4084 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| ||| |||||||||| Sbjct 4083 CAAAAGGAATCCACATTGCATCTTGT 4058 >seq22953 Length=36863 Score = 123 bits (136), Expect = 6e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| || || |||||||| || || | || || || |||||| Sbjct 13310 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCAGAC 13251 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| |||||||| || || |||||||| ||||| || || ||| Sbjct 13250 ACCATTGAAAATGTTAAAGCCAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAACAA 13191 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || || || |||||||| | || || | || || || || Sbjct 13190 CGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGGCGCACCCTGTCTGACTACAATATC 13131 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 13130 CAGAAAGAGTCCACCCTTCA-CTTG 13107 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || || || || ||||| | |||||||| || ||| Sbjct 12854 CAGATCTTCGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCTGAC 12795 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| || ||||| || || || || || ||||| || Sbjct 12794 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 12735 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || |||||| | || ||||| | ||||| | || |||||| || Sbjct 12734 CGTCTCATCTTTGCTGGTAAACAGTTGGAGGATGGCCGCACTCTGTCGGACTATAACATC 12675 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||||||||| || ||||| Sbjct 12674 CAAAAAGAATCTACTTTGCAT 12654 Score = 118 bits (130), Expect = 3e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| ||||||||||| ||||| | ||||| ||| || ||| Sbjct 14222 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAACCGTCCGAC 14163 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||| || |||||||| || || || || || || || Sbjct 14162 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 14103 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || || |||||||| || |||||||| | || | | |||||||| | Sbjct 14102 AGGCTGATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 14043 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| ||||| || || ||| | || ||| Sbjct 14042 CAAAAGGAATCTACCCTACATTTAGTATTG 14013 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| || || || ||||| || || | || || ||| Sbjct 14456 AAAATGC---AGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 14400 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| || ||||| ||||| ||||| || ||||| Sbjct 14399 CCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCA 14340 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| | || ||||| ||||| || | ||||| ||| | |||||| |||| Sbjct 14339 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTAGAAGACGGACGCACTCTTTCCGAC 14280 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 ||||| | ||||||||||| || || || |||| Sbjct 14279 TATAATATTCAAAAAGAATCTACTCTTCA-CTTG 14247 >seq39065 Length=2902 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || |||||||| ||||| || ||| ||| Sbjct 2631 CAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAC 2690 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 || |||||||| ||||| ||||| || |||||||| || || || || |||||||| Sbjct 2691 ACTATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGGATTCCCCCAGACCAGCA 2749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201201397131820