Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20ethilla_20aerotome_20[genbank_20GCA_5F001485985.1_20201 5-12-17] 164,030 sequences; 282,526,854 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq22953 111 1e-19 seq20122 96.9 3e-15 seq19342 89.7 5e-13 >seq22953 Length=36863 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||| |||||| |||| |||| ||| ||| |||||||| || ||||| ||| Sbjct 12859 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 12918 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| ||||| || || || ||||| || | |||| Sbjct 12919 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 12978 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||| | || | || |||| ||| | | |||||| | || || Sbjct 12979 ATACCCTCTTTGT-CTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 13037 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || ||||| |||||||| || |||||||| Sbjct 13038 TTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 13085 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || | ||||| || || || || ||||||||||| || Sbjct 12631 CCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGAC 12690 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | ||| || || || || || || ||||||||||| | |||| Sbjct 12691 AGAGTGCGGCCATCCTCCAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGA 12750 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||| | || | || || | ||| | | |||||| | |||||| Sbjct 12751 ATGCCCTCCTTGT-CTTGGATCTTAGCCTTAACATTTTCGATAGTGTCAGATGGCTCCAC 12809 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 12810 CTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACGAAGATCTGCAT 12857 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || || || ||||| ||||||||||| Sbjct 14227 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCGGAA 14286 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || | ||||| || ||||| |||| || ||||| || | ||| Sbjct 14287 AGAGTGCGTCCGTCTTCTAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 14346 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | ||| |||| |||| || | | ||| ||| | || || Sbjct 14347 ATGCCTTCCTTGT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAAC 14405 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| || || ||||||||||| || || || || || |||||||| || Sbjct 14406 TTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 14456 >seq20122 Length=23100 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||| ||||| || || ||||| | || || || || || || ||||| Sbjct 10440 TCCTTCTGAATGTTGTAGTCTGACAGTGTGCGTCCATCTTCAAGTTGTTTTCCAGCGAAA 10499 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || | ||||||||| | |||| | |||||| | | ||| ||||||||| ||| Sbjct 10500 ATAAGCCTCTGTTGGTCTGGAGGAATCCCCTCCTTAT-CTTGAATTTTTGCTTTAACATT 10558 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | ||||| | ||| || || | || || |||||||| || || || ||||| Sbjct 10559 TTCAATTGTGTCAGAAGGCTCAACTTCAAGAGTAATAGTTTTACCAGTAAGTGTTTTTAC 10618 Query 41851 GAAAATCTGCAT 41862 ||||| ||||| Sbjct 10619 AAAAATTTGCAT 10630 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || ||||||||||| || || || || ||||| | || || |||||||| || || || Sbjct 11580 TCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCTAGCTGCTTTCCAGCAAAA 11639 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || || | || || || | ||||| | ||| || ||| ||| |||| |||| ||| Sbjct 11640 ATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC-TGAATTTTCGCTTTAACATT 11698 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | || || | ||| || |||| || || || || || ||||| |||||||| Sbjct 11699 TTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 11758 Query 41851 GAAAATCTGCAT 41862 |||||| ||||| Sbjct 11759 GAAAATTTGCAT 11770 >seq19342 Length=14378 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| ||||||| ||| ||||| |||||||| ||||| || Sbjct 4040 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAC 4099 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || || || || || || || |||| || || ||||| | ||| Sbjct 4100 AATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGA 4159 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| || |||||| |||| || | | ||| || | |||||| Sbjct 4160 ATACCTTCCTTATCTTGGATTTTA-GCTTTTACATTTTCTATAGTATCAGAGGCCTCCAC 4218 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || ||||||||||| || ||||| |||||||| ||||| Sbjct 4219 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCAT 4266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461356103436000