Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq12252 114 1e-20 seq8788 98.7 1e-15 seq8521 95.1 1e-14 >seq12252 Length=9737 Score = 114 bits (126), Expect = 1e-20 Identities = 77/85 (91%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||| || |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 4125 AAAAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 4066 Query 60118 CACCACTATACTACCGAGGA-TTGA 60141 |||||||||||||||||||| |||| Sbjct 4065 CACCACTATACTACCGAGGACTTGA 4041 >seq8788 Length=1933 Score = 98.7 bits (108), Expect = 1e-15 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1565 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1506 Query 60125 ATACTACCGAGGATTGAAT 60143 |||||||||| || || || Sbjct 1505 ATACTACCGAAGACTGTAT 1487 >seq8521 Length=9734 Score = 95.1 bits (104), Expect = 1e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 60078 GAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1 GAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGA 60 Query 60138 TT 60139 || Sbjct 61 TT 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571583705158440