Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_002661.2 Length=42942 Score E Sequences producing significant alignments: (Bits) Value seq18169 558 1e-154 >seq18169 Length=2751 Score = 558 bits (618), Expect = 1e-154 Identities = 1165/1710 (68%), Gaps = 73/1710 (4%) Strand=Plus/Plus Query 32144 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTGGGAATTGATACA 32203 || || || ||| |||| | |||| ||| | || ||| | ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 32204 AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 32263 || ||||| |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 32264 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 32321 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 32322 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 32381 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 32382 TGTAGATTATGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTT 32441 ||| |||||||| ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 32442 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTT 32501 |||||| | |||| | | ||||| |||||| | ||| | || |||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 32502 CATAATTTATCATGGTGAAAAATATACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 32561 || |||| ||| || |||| ||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 32562 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 32621 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 32622 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAACGCCAGAA 32673 |||||||| ||| |||||| | |||| | ||||| | || || Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 32674 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACTTCGGTCAAAATG 32733 ||| | ||||| || || || | ||||| ||||| |||||||| || | | |||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 32734 ACCTATAAAATAATTGGAGATTTTA-AGCGAAAAGTACCGATTGACGAATTAGGTAACAA 32792 | ||||||||| |||| |||| || | |||||| ||||| ||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAG-AAAGTAGAAATTGATGAACTTGGTGGCAA 667 Query 32793 AAACGGCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAA 32852 ||| || | || || || | | || | |||| | ||| |||| ||| || Sbjct 668 AAATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAA 727 Query 32853 TGATACAGAGATTGGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGAT 32912 |||| || || || ||||| || ||| || ||| || ||||| || || Sbjct 728 TGATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTAT 787 Query 32913 TCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAAC 32972 || ||| || ||||||| |||| ||| || |||| ||| || || || ||| ||||||| Sbjct 788 CCGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAAC 847 Query 32973 AGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAG-GAAAAGAAAAATTATAATCCTA 33031 ||||||||||| | ||| ||||||||| || | ||| |||| |||||| |||| ||||| Sbjct 848 AGCTATAAAAGCATATGGCAAAAAGTATTCATC-GAGTGAAACGAAAAACTATAGTCCTA 906 Query 33032 TTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCG 33091 ||| ||| | | | | |||||||| | |||||| ||| ||| ||| ||| || | Sbjct 907 TTAAAACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTG 966 Query 33092 AAACAATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAA 33145 ||||| | || ||| || || | |||| || || | ||| |||||| Sbjct 967 AAACA------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAA 1020 Query 33146 CAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACG 33205 || || || ||| || ||||| || | ||||||| | | | || | || | Sbjct 1021 CACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATG 1080 Query 33206 GCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAACAATA 33261 |||| || ||| | | | ||||||| ||||| || ||| || ||||||||| Sbjct 1081 GCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAATT 1136 Query 33262 GATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAA 33321 ||||||| ||| | | |||||| ||| | | ||| | ||||| ||| || Sbjct 1137 GATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGAT 1196 Query 33322 GACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTT 33381 || || | | || | | || || | | ||| ||| || | | |||| Sbjct 1197 GATCC-----AGCGCAT-----AAACCTCCAACAGATAAG--AAGTCTAGGTTTTATGCA 1244 Query 33382 GGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATCAATAC 33441 || |||||||||||||| || ||||||||||||||||||| | |||| || ||| Sbjct 1245 GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCATAT 1304 Query 33442 AAAGCAATTGTCGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTA 33499 ||||| || || || | |||| | | || ||| ||| ||| | || ||||| | Sbjct 1305 AAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATGCAA 1362 Query 33500 ATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAAAAA 33556 |||| |||||||| | ||| | | | || | |||| | || || | | Sbjct 1363 ATACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGATGA 1419 Query 33557 AGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAA 33616 ||| || | || || ||||| || |||||| || |||||||| ||||||| | | Sbjct 1420 GTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACAGTA 1479 Query 33617 TAGAGCCAAGAGATAGCGTATTTTTTGGTCATGAATTAATGGGATATAACACTGAATTAA 33676 | | |||||||||| || |||||| || ||||||||||| | |||||||||||||| Sbjct 1480 TCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAATTAA 1539 Query 33677 AGGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCT 33732 | ||||| | ||| || ||| ||| || || ||| | || | ||||||||| Sbjct 1540 AAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTGTCG 1595 Query 33733 TTCAGCAATGAAATAAAAGATATGGTACAAATTCAACAAGCACTTAACAGACGAGTTATT 33792 ||||| |||||||||||||| ||||| ||||||||||||||| | || | |||| | | Sbjct 1596 TTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTACGT 1655 Query 33793 GCACAAGATAATAGATATAACTATCAAGCA 33822 || |||||||| | || ||| ||||||||| Sbjct 1656 GCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 289 bits (320), Expect = 8e-74 Identities = 380/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 34404 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 34461 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 34462 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 34521 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 34522 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 34581 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 34582 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 34640 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 34641 GAGTTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 34700 ||||| ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 34701 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 34760 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 34761 AGTCGTTTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 34820 | | ||| |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 34821 GGTACGCATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 34880 ||||| || || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 34881 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 34920 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137239449991504