Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_004616.1 Length=44970 Score E Sequences producing significant alignments: (Bits) Value seq18169 540 3e-149 >seq18169 Length=2751 Score = 540 bits (598), Expect = 3e-149 Identities = 1159/1709 (68%), Gaps = 71/1709 (4%) Strand=Plus/Plus Query 35941 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAACAGAGTGGGAATTGATACA 36000 || || || ||| |||| | |||| ||| | || ||||| ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 36001 AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 36060 || ||||| |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 36061 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 36118 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 36119 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 36178 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 36179 TGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTT 36238 ||| ||||| || ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 36239 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTT 36298 |||||| | |||| | | ||||| |||||| | ||| | || |||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 36299 CATAATTTATCATGGTGAAAAATACACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 36358 || |||| ||| || |||| |||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 36359 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 36418 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 36419 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAACGCCAGAA 36470 |||||||| ||| |||||| | |||| | ||||| | || || Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 36471 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACGTCAGTCAAGATG 36530 ||| | ||||| || || || | ||||| ||||| |||||||| || | ||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 36531 ACCTATAAAATAATTGGAGATTTTAAAAGAAAAATACCAATTGATGAATTAGGTAATAAA 36590 | ||||||||| |||| |||| | ||| || |||||||||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAGAAAGTAGAAATTGATGAACTTGGTGGCAAA 668 Query 36591 AATGGCTTAGAATATTGTAAAGAAGCAGTAGATTTGTTTGGTTGTATTATTTATCCAAAT 36650 ||||| | || || || | | || || |||| || |||||||| || ||| Sbjct 669 AATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAAT 728 Query 36651 GATACGGAGATATGTTTTTATTCTCCTGAAACATTCTATCAAAGAAGCGAAAAAGTAATA 36710 ||| || ||| | ||||| || |||||| ||| || || || || || Sbjct 729 GATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTATC 788 Query 36711 AGGTATCAATATAATACTGATACTGTGTCTGCTACTGTCAGTACGTTGGAATTAAGAACA 36770 | ||| || ||||||| |||| ||| || || | ||| || ||||| ||| |||||||| Sbjct 789 CGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAACA 848 Query 36771 GCTATAAAAGTTTTTGGGAAAAAGTACACAGCCGAG-GAAAAGAAAAATTATAATCCTAT 36829 |||||||||| | ||| |||||||| || |||| |||| |||||| |||| |||||| Sbjct 849 GCTATAAAAGCATATGGCAAAAAGTATTCA-TCGAGTGAAACGAAAAACTATAGTCCTAT 907 Query 36830 TAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCGC 36889 || ||| | | | | |||||||| | |||||| ||| ||| ||| ||| || | Sbjct 908 TAAAACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTGA 967 Query 36890 AACAATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAAC 36943 |||| | || ||| || || | |||| || || | ||| ||||||| Sbjct 968 AACA------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAAC 1021 Query 36944 AGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACGG 37003 | || || ||| || ||||| || | ||||||| | | | || | || || Sbjct 1022 ACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATGG 1081 Query 37004 CAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAACAATAG 37059 ||| || ||| | | | ||||||| ||||| || ||| || ||||||||| | Sbjct 1082 CAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAATTG 1137 Query 37060 ATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAAG 37119 |||||| ||| | | |||||| ||| | | ||| | ||||| ||| || | Sbjct 1138 ATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGATG 1197 Query 37120 ACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTTG 37179 | || | | || | | || || | | ||| ||| || | | |||| | Sbjct 1198 ATCC-----AGCGCAT-----AAACCTCCAACAGATAAG--AAGTCTAGGTTTTATGCAG 1245 Query 37180 GAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGACAACTCAGGTCGCAATCAATACA 37239 | |||||||||||||| || ||||||||||||||||| | |||| || ||| | Sbjct 1246 GTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCATATA 1305 Query 37240 AAGCAATTGTTGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAA 37297 |||| || ||| || | |||| | | || ||| ||| ||| | || ||||| || Sbjct 1306 AAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATGCAAA 1363 Query 37298 TACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAAAAAA 37354 ||| |||||||| | ||| | | | || | |||| | || || | | Sbjct 1364 TACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGATGAG 1420 Query 37355 GCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAAT 37414 ||| || | || || ||||| || |||||| || |||||||| ||||||| | || Sbjct 1421 TCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACAGTAT 1480 Query 37415 AGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAATTAAA 37474 | |||||||||| || | ||||| || ||||||||||| | ||||||||||||||| Sbjct 1481 CGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAATTAAA 1540 Query 37475 GGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTT 37530 ||||| | ||| || ||| ||| || || ||| | || | ||||||||| | Sbjct 1541 AGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTGTCGT 1596 Query 37531 TCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGTTATTG 37590 |||| ||||||||||| || ||||| |||||||||||||| | || | |||| | || Sbjct 1597 TCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTACGTG 1656 Query 37591 CACAAGATAATAGATATAACTATCAAGCA 37619 | |||||||| | || ||| ||||||||| Sbjct 1657 CGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 286 bits (316), Expect = 1e-72 Identities = 379/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 38201 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 38258 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 38259 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 38318 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 38319 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 38378 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 38379 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 38437 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 38438 GAATTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 38497 || || ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 38498 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 38557 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 38558 AGTCGTCTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 38617 | | || |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 38618 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 38677 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 38678 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 38717 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143726528226232