Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq5915 120 2e-22 seq24408 109 3e-19 seq26811 107 1e-18 seq3872 84.2 1e-11 >seq5915 Length=1657 Score = 120 bits (132), Expect = 2e-22 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 442 ATAAAAAGTAGTCTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 501 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||||| |||||||||||||||||||||| Sbjct 502 ACGCTCTAACCAACTGAGCTAATGGGCCGT 531 >seq24408 Length=1412 Score = 109 bits (120), Expect = 3e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||| ||| ||||||||||||||||||||| ||||||| ||||| Sbjct 111 TTGGCCCATGAGGGGATCGCACCCGCGACCTTCGCGTTATTAGCACAACGCTCTAACCAA 52 Query 11515 CTGAGCTAATGGGCCGT 11531 ||||||||||||||||| Sbjct 51 CTGAGCTAATGGGCCGT 35 >seq26811 Length=4757 Score = 107 bits (118), Expect = 1e-18 Identities = 77/88 (88%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||| |||| || ||||||||| | |||||||||| |||||||||||||||||||||| Sbjct 1966 ATAACAAAT-AACTTGGCCCATAAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 1908 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 | ||||| ||||||||| |||||||||| Sbjct 1907 ATGCTCTAACCAACTGAACTAATGGGCC 1880 >seq3872 Length=860 Score = 84.2 bits (92), Expect = 1e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 666 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 609 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261386914285948