Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq11934 127 3e-25 seq908 127 3e-25 >seq11934 Length=4422 Score = 127 bits (140), Expect = 3e-25 Identities = 201/286 (70%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| || ||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 466 CGCTAAACGCCATAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 407 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | || | ||||| ||||| ||||| | || || || | || ||||| | Sbjct 406 AAGAAGATTAGCAAGACGTGGCGGAGTTAAGCGCATTTCCGGTTTAATTTACGAAGAAAC 347 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||||||||| || || | | || || ||||| | ||||| || Sbjct 346 GCGCGGAGTTTTGAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTAACTTATACTGA 287 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | |||||||| ||| | |||||| | || || ||||||||| | ||||| Sbjct 286 ACACGCTAAAAGGAAGACTGTTACCGCTATGGATGTGGTTTACGCATTGAAAAGACAAGG 227 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT--CAAACTT 16715 ||| | | | ||||| |||||| | | || || | || ||||||| Sbjct 226 CCGCACGTTGTATGGATTTGGAGGATGAT-TTATGATAGCAAACTT 182 >seq908 Length=3884 Score = 127 bits (140), Expect = 3e-25 Identities = 193/275 (70%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 160 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCCATC 219 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 220 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 279 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| || |||| || || || || || ||| Sbjct 280 CGCGGAGTGCTGAAGGTGTTCCTCGAGAATGTGATCCGCGACGCCGTCACGTACACGGAG 339 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 340 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 399 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707 || | | || || || || |||||| || ||| Sbjct 400 CGCACTCTGTACGGCTTCGGCGGTTAATGTTTTAA 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79045281132039