Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq18169 540 3e-149 >seq18169 Length=2751 Score = 540 bits (598), Expect = 3e-149 Identities = 1164/1715 (68%), Gaps = 83/1715 (5%) Strand=Plus/Plus Query 15398 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAACAGAGTGGGAATTGATACA 15457 || || || ||| |||| | |||| ||| | || ||||| ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 15458 AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 15517 || ||||| |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 15518 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 15575 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 15576 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 15635 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 15636 TGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTT 15695 ||| ||||| || ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 15696 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTT 15755 |||||| | |||| | | ||||| |||||| | ||| | || |||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 15756 CATAATTTATCATGGTGAAAAATACACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 15815 || |||| ||| || |||| |||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 15816 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 15875 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 15876 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAACGCCAGAA 15927 |||||||| ||| |||||| | |||| | ||||| | || || Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 15928 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACGTCAGTCAAGATG 15987 ||| | ||||| || || || | ||||| ||||| |||||||| || | ||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 15988 ACCTATAAAATAATTGGAGATTTTAAAAGAAAAATACCAATTGATGAATTAGGTAATAAA 16047 | ||||||||| |||| |||| | ||| || |||||||||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAGAAAGTAGAAATTGATGAACTTGGTGGCAAA 668 Query 16048 AATGGCTTAGAATATTGTAAAGAAGCAGTAGATTTGTTTGGTTGTATTATTTATCCAAAT 16107 ||||| | || || || | | || || |||| || |||||||| || ||| Sbjct 669 AATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAAT 728 Query 16108 GATACGGAGATATGTTTTTATTCTCCTGAAACATTCTATCAAAGAAGCGAAAAAGTAATA 16167 ||| || ||| | ||||| || |||||| ||| || || || || || Sbjct 729 GATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTATC 788 Query 16168 AGGTATCAATATAATACTGATACTGTGTCTGCTACTGTCAGTACGTTGGAATTAAGAACA 16227 | ||| || ||||||| |||| ||| || || | ||| || ||||| ||| |||||||| Sbjct 789 CGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAACA 848 Query 16228 GCTATAAAAGTTTTTGGGAAAAAGTACACAGCCGAG-GAAAAGAAAAATTATAATCCTAT 16286 |||||||||| | ||| |||||||| || |||| |||| |||||| |||| |||||| Sbjct 849 GCTATAAAAGCATATGGCAAAAAGTATTCA-TCGAGTGAAACGAAAAACTATAGTCCTAT 907 Query 16287 TAAA-----ACAACTGACATTAATTACTCAAATGATTTCATAAAAGAAGGTACTTATCGC 16341 |||| |||||||||| || |||| | ||| | ||| ||| ||| ||| Sbjct 908 TAAAACGCCACAACTGACA-----TATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTAT 962 Query 16342 ACAGAAACAATTGGTTCTAAAGCAACTATTAACTTTGAT----TGCAAGTATGGTAATGA 16397 | |||||| | ||||| ||| | || | |||| || || | ||| |||| Sbjct 963 AGTGAAACACCAAATGCTAAA-CAA-TCGTA--TGTGATTACGTGTAAATTTGGCGATGA 1018 Query 16398 AACAGTTAGATTTACAATCAAAAAAGGTTCCCAAGGTGGAATATATAAGTTGATTTTAGA 16457 |||| || || ||| || ||||||||| | ||||||| | | | || | || Sbjct 1019 AACACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGA 1078 Query 16458 CGGCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAACAA 16513 ||||| || ||| | | | ||||||| ||||| || ||| || |||||||| Sbjct 1079 TGGCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAA 1134 Query 16514 TAGATTTAATAAAAAATATTGATAAAGGTAAGCATGTTTTAGAAATGATATTTTTAGGAG 16573 | ||||||| ||| | | |||||| || | | ||| | ||||| ||| | Sbjct 1135 TTGATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTG 1194 Query 16574 AAGACCCCAAAAATAGAATTGATAAGTCTTCAA---ATAAAAAAGCTAAGCCTTGTATGT 16630 | || || | |||| || ||| |||| || ||| | || |||| Sbjct 1195 ATGATCC---------AGCGCATAAACCTCCAACAGATAAGAAGTCTAGG--TTTTATGC 1243 Query 16631 ACGTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGACAACTCAGGTCGCAATC 16690 | || |||||||||||||| || ||||||||||||||||| | |||| || Sbjct 1244 A----GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAG 1299 Query 16691 AATACAAAGCAATTGTTGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATA 16748 ||| ||||| || ||| || | |||| | | || ||| ||| ||| | || || Sbjct 1300 CATATAAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTA 1357 Query 16749 TGCTAATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGC 16805 ||| ||||| |||||||| | ||| | | | || | |||| | || || Sbjct 1358 TGCAAATACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGC 1414 Query 16806 AAAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGA 16865 | | ||| || | || || ||||| || |||||| || |||||||| ||||||| Sbjct 1415 GATGAGTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGA 1474 Query 16866 AAAAATAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGA 16925 | || | |||||||||| || | ||||| || ||||||||||| | ||||||||| Sbjct 1475 CAGTATCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGA 1534 Query 16926 ATTAAAGGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAG 16981 |||||| ||||| | ||| || ||| ||| || || ||| | || | ||||| Sbjct 1535 ATTAAAAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAG 1590 Query 16982 TGTCTTTCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAG 17041 |||| ||||| ||||||||||| || ||||| |||||||||||||| | || | |||| Sbjct 1591 TGTCGTTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGAT 1650 Query 17042 TTATTGCACAAGATAATAGATATAACTATCAAGCA 17076 | ||| |||||||| | || ||| ||||||||| Sbjct 1651 TACGTGCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 295 bits (326), Expect = 2e-75 Identities = 381/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 17658 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 17715 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 17716 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 17775 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 17776 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 17835 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 17836 TA-AACAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 17894 || |||||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 17895 GAATTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 17954 || || ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 17955 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 18014 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 18015 AGTCGTTTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 18074 | | ||| |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 18075 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 18134 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 18135 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 18174 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146576620290898