Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_007053.1 Length=43095 Score E Sequences producing significant alignments: (Bits) Value seq18169 540 3e-149 >seq18169 Length=2751 Score = 540 bits (598), Expect = 3e-149 Identities = 1161/1710 (68%), Gaps = 73/1710 (4%) Strand=Plus/Plus Query 15467 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTGGGAATTGATACA 15526 || || || ||| |||| | |||| ||| | || ||| | ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 15527 AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACATC 15586 || ||||| |||| ||||||||||| |||||||||||||||||||| || ||||| | Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 15587 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 15644 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 15645 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 15704 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 15705 TGTAGATTATGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACTTT 15764 ||| |||||||| ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 15765 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTCGATTTACTAATTTGTGAAAACTT 15824 |||||| | |||| | | ||||| |||||| | || | |||||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 15825 CATAATTTATCATGGTGAAAAATACACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 15884 || |||| ||| || |||| |||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 15885 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 15944 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 15945 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAACGCCAGAA 15996 |||||||| ||| |||||| | |||| | ||||| | || || Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 15997 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACTTCGGTCAAAATG 16056 ||| | ||||| || || || | ||||| ||||| |||||||| || | | |||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 16057 ACCTATAAAATAATTGGAAATTTTA-AGCGAAAAGTACCGATTGACGAATTAGGTAACAA 16115 | ||||||||| |||| |||| || | |||||| ||||| ||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAG-AAAGTAGAAATTGATGAACTTGGTGGCAA 667 Query 16116 AAACGGCTTAGAATACTGTAAAGAAGCGGTAGACCTATTTGGCTGTATAATTTACCCAAA 16175 ||| || | || || || | | || |||||| | ||| |||| ||| || Sbjct 668 AAATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAA 727 Query 16176 TGATACGGAGATATGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGAT 16235 |||| || ||| | ||||| || ||| || ||| || ||||| || || Sbjct 728 TGATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTAT 787 Query 16236 TCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAAC 16295 || ||| || ||||||| |||| ||| || |||| ||| || || || ||| ||||||| Sbjct 788 CCGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAAC 847 Query 16296 AGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAG-GAAAAGAAAAATTATAATCCTA 16354 ||||||||||| | ||| ||||||||| || | ||| |||| |||||| |||| ||||| Sbjct 848 AGCTATAAAAGCATATGGCAAAAAGTATTCATC-GAGTGAAACGAAAAACTATAGTCCTA 906 Query 16355 TTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCG 16414 ||| ||| | | | | |||||||| | |||||| ||| ||| ||| ||| || | Sbjct 907 TTAAAACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTG 966 Query 16415 CAACAATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAA 16468 |||| | || ||| || || | |||| || || | ||| |||||| Sbjct 967 AAACA------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAA 1020 Query 16469 CAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACG 16528 || || || ||| || ||||| || | ||||||| | | | || | || | Sbjct 1021 CACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATG 1080 Query 16529 GCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAACAATA 16584 |||| || ||| | | | ||||||| ||||| || ||| || ||||||||| Sbjct 1081 GCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAATT 1136 Query 16585 GATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAA 16644 ||||||| ||| | | |||||| ||| | | ||| | ||||| ||| || Sbjct 1137 GATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGAT 1196 Query 16645 GACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTT 16704 || || | | || | | || || | | ||| ||| || | | |||| Sbjct 1197 GATCC-----AGCGCAT-----AAACCTCCAACAGATAAG--AAGTCTAGGTTTTATGCA 1244 Query 16705 GGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGACAACTCAGGTCGCAATCAATAC 16764 || |||||||||||||| || ||||||||||||||||| | |||| || ||| Sbjct 1245 GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCATAT 1304 Query 16765 AAAGCAATTGTTGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTA 16822 ||||| || ||| || | |||| | | || ||| ||| ||| | || ||||| | Sbjct 1305 AAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATGCAA 1362 Query 16823 ATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAAAAA 16879 |||| |||||||| | ||| | | | || | |||| | || || | | Sbjct 1363 ATACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGATGA 1419 Query 16880 AGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAA 16939 ||| || | || || ||||| || |||||| || |||||||| ||||||| | | Sbjct 1420 GTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACAGTA 1479 Query 16940 TAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAATTAA 16999 | | |||||||||| || | ||||| || ||||||||||| | |||||||||||||| Sbjct 1480 TCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAATTAA 1539 Query 17000 AGGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCT 17055 | ||||| | ||| || ||| ||| || || ||| | || | ||||||||| Sbjct 1540 AAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTGTCG 1595 Query 17056 TTCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGTTATT 17115 ||||| ||||||||||| || ||||| |||||||||||||| | || | |||| | | Sbjct 1596 TTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTACGT 1655 Query 17116 GCACAAGATAATAGATATAACTATCAAGCA 17145 || |||||||| | || ||| ||||||||| Sbjct 1656 GCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 289 bits (320), Expect = 8e-74 Identities = 380/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 17727 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 17784 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 17785 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 17844 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 17845 AACATTTAGACGATTGGGAAACCCAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 17904 | || | | ||||| || | || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 17905 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 17963 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 17964 GAATTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 18023 || || ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 18024 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 18083 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 18084 AGTCGTCTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 18143 | | || |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 18144 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 18203 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 18204 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 18243 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137728859739982