Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_007054.1 Length=44777 Score E Sequences producing significant alignments: (Bits) Value seq18169 562 9e-156 >seq18169 Length=2751 Score = 562 bits (622), Expect = 9e-156 Identities = 1166/1710 (68%), Gaps = 73/1710 (4%) Strand=Plus/Plus Query 15399 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTGGGAATTGATACA 15458 || || || ||| |||| | |||| ||| | || ||| | ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 15459 AATAGAGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 15518 || ||||| |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 15519 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 15576 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 15577 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 15636 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 15637 TGTAGATTATGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTT 15696 ||| |||||||| ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 15697 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTT 15756 |||||| | |||| | | ||||| |||||| | ||| | || |||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 15757 CATAATTTATCATGGTGAAAAATATACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 15816 || |||| ||| || |||| ||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 15817 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 15876 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 15877 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAACGCCAGAA 15928 |||||||| ||| |||||| | |||| | ||||| | || || Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 15929 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACTTCGGTCAAAATG 15988 ||| | ||||| || || || | ||||| ||||| |||||||| || | | |||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 15989 ACCTATAAAATAATTGGAGATTTTA-AGCGAAAAGTACCGATTGACGAATTAGGTAACAA 16047 | ||||||||| |||| |||| || | |||||| ||||| ||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAG-AAAGTAGAAATTGATGAACTTGGTGGCAA 667 Query 16048 AAACGGCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAA 16107 ||| || | || || || | | || | |||| | ||| |||| ||| || Sbjct 668 AAATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAA 727 Query 16108 TGATACAGAGATTGGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGAT 16167 |||| || || || ||||| || ||| || ||| || ||||| || || Sbjct 728 TGATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTAT 787 Query 16168 TCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAAC 16227 || ||| || ||||||| |||| ||| || |||| ||| || || || ||| ||||||| Sbjct 788 CCGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAAC 847 Query 16228 AGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAG-GAAAAGAAAAATTATAATCCTA 16286 ||||||||||| | ||| ||||||||| || | ||| |||| |||||| |||| ||||| Sbjct 848 AGCTATAAAAGCATATGGCAAAAAGTATTCATC-GAGTGAAACGAAAAACTATAGTCCTA 906 Query 16287 TTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCG 16346 ||| ||| | | | | |||||||| | |||||| ||| ||| ||| ||| || | Sbjct 907 TTAAAACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTG 966 Query 16347 AAACAATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAA 16400 ||||| | || ||| || || | |||| || || | ||| |||||| Sbjct 967 AAACA------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAA 1020 Query 16401 CAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACG 16460 || || || ||| || ||||| || | ||||||| | | | || | || | Sbjct 1021 CACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATG 1080 Query 16461 GCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAACAATA 16516 |||| || ||| | | | ||||||| ||||| || ||| || ||||||||| Sbjct 1081 GCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAATT 1136 Query 16517 GATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAA 16576 ||||||| ||| | | |||||| ||| | | ||| | ||||| ||| || Sbjct 1137 GATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGAT 1196 Query 16577 GACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTT 16636 || || | | || | | || || | | ||| ||| || | | |||| Sbjct 1197 GATCC-----AGCGCAT-----AAACCTCCAACAGATAAG--AAGTCTAGGTTTTATGCA 1244 Query 16637 GGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATCAATAC 16696 || |||||||||||||| || ||||||||||||||||||| | |||| || ||| Sbjct 1245 GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCATAT 1304 Query 16697 AAAGCAATTGTCGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTA 16754 ||||| || || || | |||| | | || ||| ||| ||| | || ||||| | Sbjct 1305 AAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATGCAA 1362 Query 16755 ATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAAAAA 16811 |||| |||||||| | ||| | | | || | |||| | || || | | Sbjct 1363 ATACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGATGA 1419 Query 16812 AGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAA 16871 ||| || | || || ||||| || |||||| || |||||||| ||||||| | | Sbjct 1420 GTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACAGTA 1479 Query 16872 TAGAGCCAAGAGATAGCGTATTTTTTGTTCATGAATTAATGGGATATAACACTGAATTAA 16931 | | |||||||||| || ||||||| || ||||||||||| | |||||||||||||| Sbjct 1480 TCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAATTAA 1539 Query 16932 AGGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCT 16987 | ||||| | ||| || ||| ||| || || ||| | || | ||||||||| Sbjct 1540 AAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTGTCG 1595 Query 16988 TTCAGCAATGAAATAAAAGATATGGTACAAATTCAACAAGCACTTAACAGACGAGTTATT 17047 ||||| |||||||||||||| ||||| ||||||||||||||| | || | |||| | | Sbjct 1596 TTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTACGT 1655 Query 17048 GCACAAGATAATAGATATAACTATCAAGCA 17077 || |||||||| | || ||| ||||||||| Sbjct 1656 GCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 286 bits (316), Expect = 1e-72 Identities = 379/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 17659 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 17716 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 17717 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 17776 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 17777 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 17836 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 17837 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 17895 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 17896 GAATTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 17955 || || ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 17956 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 18015 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 18016 AGTCGTCTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 18075 | | || |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 18076 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 18135 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 18136 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 18175 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143109168216714