Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq366 141 1e-28 seq9180 136 4e-27 seq25834 132 5e-26 seq15671 132 5e-26 >seq366 Length=4586 Score = 141 bits (156), Expect = 1e-28 Identities = 90/95 (95%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGCG 126323 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 4008 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCTCTGGGAGCG 4067 Query 126324 TGGGTTCGAACCCCACACCTGACA-AATTATTATT 126357 |||||||||||||||||||||||| | || ||||| Sbjct 4068 TGGGTTCGAACCCCACACCTGACAGACTTTTTATT 4102 >seq9180 Length=2980 Score = 136 bits (150), Expect = 4e-27 Identities = 83/87 (95%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 78 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 137 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 138 GTGGGTTCGAACCCCACACCTGACAAA 164 >seq25834 Length=6242 Score = 132 bits (146), Expect = 5e-26 Identities = 81/85 (95%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 5834 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 5775 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 5774 TGGGTTCGAACCCCACACCTGACAA 5750 >seq15671 Length=3426 Score = 132 bits (146), Expect = 5e-26 Identities = 81/85 (95%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| Sbjct 311 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 370 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||||||||||| Sbjct 371 GTGGGTTCGAACCCCACACCTGACA 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556633023050520