Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3894 91.5 3e-13 seq29953 89.7 1e-12 seq29987 87.8 4e-12 seq2815 87.8 4e-12 seq2814 87.8 4e-12 seq2813 87.8 4e-12 >seq3894 Length=8898 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1172 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1231 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1232 CCCCACGTTGGGC 1244 >seq29953 Length=4656 Score = 89.7 bits (98), Expect = 1e-12 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 142046 AACGCAT-GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGG 142104 ||| ||| ||| |||||||||| ||| ||||||||||||||||||||||||||| | || Sbjct 833 AACACATCGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGG 892 Query 142105 GTTCGACCCCCGCCAGAGA 142123 |||||| |||| |||| || Sbjct 893 GTTCGATCCCCACCAGGGA 911 >seq29987 Length=3474 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 2595 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 2654 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 2655 CCCACCAGGGA 2665 >seq2815 Length=2746 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1180 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1121 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 1120 CCCACCAGGGA 1110 >seq2814 Length=3434 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1869 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1810 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 1809 CCCACCAGGGA 1799 >seq2813 Length=11756 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 10825 GTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 10766 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 10765 CCCACCAGGGA 10755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027405865610043