Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq12252 105 7e-18 seq8521 93.3 5e-14 seq8788 91.5 2e-13 >seq12252 Length=9737 Score = 105 bits (116), Expect = 7e-18 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| || |||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 4125 AAAAATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 4066 Query 57059 CACCACTATACTACCGAGGA-TTGA 57082 |||||||||||||||||||| |||| Sbjct 4065 CACCACTATACTACCGAGGACTTGA 4041 >seq8521 Length=9734 Score = 93.3 bits (102), Expect = 5e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 2 AATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGAT 61 Query 57080 T 57080 | Sbjct 62 T 62 >seq8788 Length=1933 Score = 91.5 bits (100), Expect = 2e-13 Identities = 84/103 (82%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1565 TCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1506 Query 57066 ATACTACCGAGGATTGAATATATAA--CTTGAATATTGCAATT 57106 |||||||||| || || || || || ||||| || |||||| Sbjct 1505 ATACTACCGAAGACTGTAT-TAAAAGTGTTGAA-ATAGCAATT 1465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542990605594320