Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_011612.1 Length=45344 Score E Sequences producing significant alignments: (Bits) Value seq18169 547 2e-151 >seq18169 Length=2751 Score = 547 bits (606), Expect = 2e-151 Identities = 1159/1704 (68%), Gaps = 64/1704 (4%) Strand=Plus/Plus Query 35349 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAACAGAGTGGGAATTGATACA 35408 || || || ||| |||| | |||| ||| | || ||||| ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 35409 AATAGAGGCATTATAACATTAGTGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 35468 || ||||| |||| ||||||| ||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 35469 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATCTATAGGTAGG-TGATTTAATGGA 35526 | | | |||| | || ||||| |||||||| |||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 35527 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 35586 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 35587 TGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACTTT 35646 ||| ||||| || ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 35647 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTCGATTTACTAATTTGTGAAAATTT 35706 |||||| | |||| | | ||||| |||||| | || | |||||||||| || || Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 35707 CATTATTTATCATGGTGAAAAATACACAATCAAGCAGACAGCACCGAAGGTTGAGGGAGA 35766 || |||| ||| || |||| |||| || || || ||| | ||||||| || || | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 35767 AAAAGTTTTTATTGAAGTTACGGCATATCATATTATGTATGAATTTCAAAATCACTCTAT 35826 | |||| ||||||||||| ||| |||| | ||||||||||| |||||||| | | | Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 35827 TGAATCAAA---TAAACTTGATGAAAATAGCGAATCTTCAAAAACGCCAGAA---TACAC 35880 ||||||||| |||| ||||| | | | | | | |||| | || ||||| Sbjct 497 TGAATCAAACCGTAAA---GATGATGAGGGTGCAACAGAAGAAACCACTCAATCGTACAC 553 Query 35881 GTTAGAAGAGTATTTGAGATACGGATTTGCAAATCAAAAAACTTCGGTCAAAATGACCTA 35940 ||||||||| ||||||| ||| | ||||| |||||||| || | | |||| | | || Sbjct 554 GTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTCAAATA 613 Query 35941 TAAAATAATTGGAGATTTTA-AGCGAAAAGTACCGATTGACGAATTAGGTAACAAAAACG 35999 ||||||| |||| |||| || | |||||| ||||| ||| | ||| |||||| | Sbjct 614 TAAAATATATGGATCGTTTACAGAG-AAAGTAGAAATTGATGAACTTGGTGGCAAAAATG 672 Query 36000 GCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAATGATA 36059 | | || || || | | || | |||| | ||| |||| ||| |||||| Sbjct 673 GTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAATGATG 732 Query 36060 CAGAGATTGGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGATTCGAT 36119 || || || ||||| || ||| || ||| || ||||| || || || | Sbjct 733 ATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTATCCGTT 792 Query 36120 ATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAACAGCTA 36179 || || ||||||| |||| ||| || |||| ||| || || || ||| |||||||||||| Sbjct 793 ATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAACAGCTA 852 Query 36180 TAAAAGTTTTTGGAAAAAAGTATACAGCTGAG-GAAAAGAAAAATTATAATCCTATTAGA 36238 |||||| | ||| ||||||||| || | ||| |||| |||||| |||| |||||||| | Sbjct 853 TAAAAGCATATGGCAAAAAGTATTCATC-GAGTGAAACGAAAAACTATAGTCCTATTAAA 911 Query 36239 ACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCGAAACA 36298 || | | | | |||||||| | |||||| ||| ||| ||| ||| || |||||| Sbjct 912 ACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTGAAACA 971 Query 36299 ATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAACAGTT 36352 | || ||| || || | |||| || || | ||| |||||||| || Sbjct 972 ------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAACACTT 1025 Query 36353 AGATTTACAATaaaaaaaGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACGGCAAG 36412 || ||| || |||||||| | ||||||| | | | || | || ||||| Sbjct 1026 CGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATGGCAA- 1084 Query 36413 CAAATTAAGCA-AATTTCTTGTTTTGCTAAGT--TGGTTCAGTCTGAAACAATAGATTTA 36469 || ||| | | | ||||||| ||||| | | | || ||||||||| |||||| Sbjct 1085 CAGTTTAGGGACTAAATCTTGTTGGGCTAAATCATCATCAAG--TGAAACAATTGATTTA 1142 Query 36470 ATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAAGACCCC 36529 | ||| | | |||||| ||| | | ||| | ||||| ||| || || || Sbjct 1143 AAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGATGATCC- 1201 Query 36530 AAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTTGGAACT 36589 | | || | | || || | | ||| ||| || | | |||| || ||| Sbjct 1202 ----AGCGCAT-----AAACCTCCAACAGATAAG--AAGTCTAGGTTTTATGCAGGTACT 1250 Query 36590 GAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATCAATACAAAGCA 36649 ||||||||||| || ||||||||||||||||||| | |||| || ||| ||||| Sbjct 1251 GAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCATATAAAGCT 1310 Query 36650 ATTGTCGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAATACGC 36707 || || || | |||| | | || ||| ||| ||| | || ||||| ||||| Sbjct 1311 GTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATGCAAATACCG 1368 Query 36708 AAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAAAAAAGCAAA 36764 |||||||| | ||| | | | || | |||| | || || | | ||| Sbjct 1369 TCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGATGAGTCAAT 1425 Query 36765 TAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAATAGAGC 36824 || | || || ||||| || |||||| || |||||||| ||||||| | || | | Sbjct 1426 TACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACAGTATCGGAC 1485 Query 36825 CAAGAGATAGCGTATTTTTTGTTCATGAATTAATGGGATATAACACTGAATTAAAGGTTG 36884 ||||||||| || ||||||| || ||||||||||| | ||||||||||||||| |||| Sbjct 1486 CAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAATTAAAAGTTG 1545 Query 36885 TTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTTTCAGC 36940 | | ||| || ||| ||| || || ||| | || | ||||||||| ||||| Sbjct 1546 TAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTGTCGTTCAGT 1601 Query 36941 AATGAAATAAAAGATATGGTACAAATTCAACAAGCACTTAACAGACGAGTTATTGCACAA 37000 |||||||||||||| ||||| ||||||||||||||| | || | |||| | ||| ||| Sbjct 1602 AATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTACGTGCGCAA 1661 Query 37001 GATAATAGATATAACTATCAAGCA 37024 ||||| | || ||| ||||||||| Sbjct 1662 GATAACAAATTTAATTATCAAGCA 1685 Score = 295 bits (326), Expect = 2e-75 Identities = 381/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 37606 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 37663 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 37664 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 37723 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 37724 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 37783 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 37784 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 37842 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 37843 GAGTTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 37902 ||||| ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 37903 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 37962 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 37963 AGTCGTTTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 38022 | | ||| |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 38023 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 38082 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 38083 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 38122 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144922863166956