Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_011614.1 Length=42526 Score E Sequences producing significant alignments: (Bits) Value seq18169 109 1e-19 >seq18169 Length=2751 Score = 109 bits (120), Expect = 1e-19 Identities = 219/319 (69%), Gaps = 17/319 (5%) Strand=Plus/Plus Query 31290 GAATATCGATTCGAACCAAAAGAGCAAGAACCGGAATTCATCACTGACTTATCGCCGTAT 31349 |||||||| || |||||| | | ||||| |||| | || || ||| |||| | Sbjct 2438 GAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTCGTAACAGAATTAGCGCCTTTA 2497 Query 31350 ACAAATGCAGTAATGCAATCATTTTGGGTAGACCCTAAAACAAAAATTATT---TATATG 31406 ||||| ||||| ||||| ||||||||| | || ||| |||| |||| |||||| Sbjct 2498 ACAAACGCAGTTATGCAGTCATTTTGGTTTGA---TAATCGAAAAGGTATTGTCTATATG 2554 Query 31407 ACACAAGCGCGTCCAGGCAATCATTACATGCTATCTAGATTGAAGCCTAATGGACAATTT 31466 |||||||| | ||| || || ||||| | ||||| || || || |||| | Sbjct 2555 ACACAAGC---TAGAGGTAACGGATATATGCTCACAAGATTACGACCAAACGGGCAATAT 2611 Query 31467 ATTGATAGACTGCTTGTTAAAAATGGCGGTCACGGCACACACAATGCGTATAGATACATT 31526 || ||||| ||||||| ||| |||||||| |||||||||| || | || || Sbjct 2612 ATAGATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAATGGTTACCGTTATATA 2671 Query 31527 AATGGAGAATTATGGATTTATTCAGCTGT----ATTGGACAGTAACAAAAACAACAAGTT 31582 ||| ||| | ||||| |||||| | | | ||| || |||| ||||| ||| || Sbjct 2672 GATGATGAACTTTGGATATATTCATTTATTAAAAATGG-CAATAACCAAAAC-ACA--TT 2727 Query 31583 TGTACGTTTTAAATATAGA 31601 || || || ||||||||| Sbjct 2728 AGTTCGGTTCAAATATAGA 2746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135908767276688