Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq10663 232 3e-55 seq18205 192 2e-43 >seq10663 Length=11193 Score = 232 bits (256), Expect = 3e-55 Identities = 1014/1579 (64%), Gaps = 34/1579 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||||| || |||||| | || || || | ||| ||||| ||||| | || | || ||| Sbjct 2822 GCAATCGGCATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCACGGTAAT 2763 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || || ||||| ||||| ||||| |||| || || |||| || || || Sbjct 2762 GTGGACATCATAGCGAATGATCAAGGGAATAGAACCACACCGTCATACGTTGCCTTCACC 2703 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAATCAATGGTAAATTCAAATGCCAAAAAC 451093 ||| | ||| | || | || | || || ||| ||| | ||| | | ||| Sbjct 2702 GATACTGAACGCCTAATTGGAGACGCGGCGAAAAACCAGGTTGCCTTAAACCCAATTAAC 2643 Query 451094 ACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAA 451153 ||||||| ||| || || || |||| || | | || |||||| || |||| || Sbjct 2642 ACAGTATTTGACGCAAAGCGGCTAATAGGTAGGAAATACGATGATCCTAAAATACAGCAA 2583 Query 451154 GAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTA 451213 || |||| | ||| | | ||||||||| ||| || || || | || ||||| Sbjct 2582 GACCTAAAACATTGGCCTTTTAAAGTAGTAAATGAAAGTGGGAAACCAAAAATACAAGTT 2523 Query 451214 AATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTT-CATCTATGGTTCTTAC 451272 | | ||||||| | |||||| |||||| ||||||||||| || | |||||||| | Sbjct 2522 ACTCATAAAGGAAAGACTAAACGTTTTGCACCTGAAGAAATAAGCAGC-ATGGTTCTAAT 2464 Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332 ||||||||||| || |||||| ||| | || || | || | | | || || || || Sbjct 2463 AAAAATGAAAGAGACGGCAGAATCGTATTTGGGGTCATCCGTAAGTAAGGCGGTTATCAC 2404 Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 ||||| || || || || || | ||||| |||||||| |||||||| || |||||| Sbjct 2403 AGTTCCTGCCTACTTTAACGACTCTCAACGACAAGCAACAAAAGATGCTGGGACTATTGC 2344 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 || |||||||||||||||| || || |||||||| ||||| || | || || || | Sbjct 2343 CGGACTAAATGTTCTTCGAATCATAAACGAACCTACTGCAGCAGCATTGGCTTACGGCTT 2284 Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512 || || ||| || || || | || || | | |||||||| || || || || Sbjct 2283 AGATAA---AAATTTAAAAGGTGAGAGGAACGTTCTGATTTTTGATTTAGGCGGCGGTAC 2227 Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAACCAA 451569 |||| ||| || | || || || || | ||||| || || |||| Sbjct 2226 CTTTGATGTTTCCATATTGAACATCGACGAAGGATCTCTTTTTGAGGTCAAATCAACTGC 2167 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATGGTTGAAAAC 451629 ||| ||||||||||| || || ||||| |||| | | || | | || | | Sbjct 2166 TGGAGATACTCATCTCGGCGGAGAAGACTTTGACAGCCGCCTAGTCAACTTCTT---AGC 2110 Query 451630 TGATG---TTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCACTTAGACG 451686 ||||| || || |||||| || ||| | | ||||| |||||| || | || Sbjct 2109 TGATGAGTTTAAAAGAAAACATAAGAAAGACCTCCATTCTAACTCAAAAGCGCTACGCCG 2050 Query 451687 TCTTAAAACATCAGCAGAAAAAGCTAAAATTACACTCAGTTC-AACACAAACTACTAGTA 451745 || | |||| ||||||| | ||||| ||||| ||| | || | ||| | Sbjct 2049 CCTCAGAACAGCAGCAGAGAGGGCTAAGCGCACACTTTCTTCTAGTACGGA-AGCTAACA 1991 Query 451746 TAAACATTGATAGTTTAGTTGATGGAATGGATTATGCTACTACTCTTACCCGTGCTAAAT 451805 | | ||||| |||| || || || |||| | | | || | | || | || Sbjct 1990 TCGAAATTGACGCTTTATACGAAGGCATAGATTTCTATTCAAGAGTTTCTAGAGCAAGAT 1931 Query 451806 TTGA--ATCAATTTGTTCCAGTATTTTTGCACGGGTAATGAAACCTGTTGATCAAG-TAT 451862 |||| | | || | | | ||| | || | | | || || || | | | | Sbjct 1930 TTGAGGAGCTGAATGCT-GATTTATTTCGAACAACT-TTAGATCCAGTAGAAAAGGCTCT 1873 Query 451863 TACATGATTCTAAAATTAG-TAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCT 451921 || | || || ||||||| ||| || |||| |||| || ||| | || || || || Sbjct 1872 TA-AAGACGCT-AAATTAGATAAGAATTCAATTAATGACATCGTGTTAGTTGGGGGCTCG 1815 Query 451922 ACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATTTTGGAGGAAAACAACT--AT 451979 ||||| ||||| ||||| || | || ||| || |||||| | || || Sbjct 1814 ACACGGATTCCAAAAATCCAGTCCCTTCTGCAAACTTTCTTCAATGGAAAAAAGCTCAAT 1755 Query 451980 GTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTC 452039 || ||||||| || ||||| |||||||| || ||||||||||| |||||||| | Sbjct 1754 TTA--TCTATAAATCCAGACGAAGCCGTTGCATACGGAGCTGCAGTTCAGGCAGCTATAC 1697 Query 452040 TAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTAT 452099 ||| || | || || | ||| || || | || ||||| || ||| | | Sbjct 1696 TAAGTGGCGACAAACATTCTAAGATCCAAGACGTTTTGCTGGTGGATGTGACTCCTTTGT 1637 Query 452100 CTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTA 452159 | || || | || || ||||| ||| | ||||| ||| || | | ||| || | Sbjct 1636 CACTAGGTATAGAGACGGCTGGAGGAGTTATGACAAATATAGTAGATCGAAATGCTAAAA 1577 Query 452160 TTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAG-TGATAACCAACCAGGTGTAACT 452218 | || || ||| | |||||||| | || | | | ||| || || || | || ||| Sbjct 1576 TACCCTGCAAACATTCCCAAACATTCACAAC-GTACGCTGACAATCAGCCTGCAGTCACT 1518 Query 452219 ATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT 452278 || ||||||| |||||||||| | |||||||| ||| || ||| | | || ||| Sbjct 1517 ATACAAGTGTATGAAGGAGAAAGAGCAATGACTAAAGACAACAATTTATTGGGGACATTC 1458 Query 452279 ACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGAT 452338 | | | || || || ||| | || ||||||||| || |||||| |||| Sbjct 1457 GATTTGACGGGTATACCGCCAGCTCCACGTGGTGTTCCTCAAATAGACGTTACCTTTGAT 1398 Query 452339 GTTGATGCAAATGGTATTCTTAATGTGAGTGC--AGTTGAAAAATCATCTGGAAAATCAG 452396 | ||||| ||||| || | ||||| || | ||| ||| | | ||||| || Sbjct 1397 TTAGATGCGAATGGAATATTAAATGTTTCCGCTAAAGAGAACAAT-AGC-GGAAAGTCGA 1340 Query 452397 AAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGG 452456 | || || ||||| ||||||||| ||||||||| ||| ||||| || ||||| Sbjct 1339 AGAACATAGTAATTAAAAATGATAAAGGTCGTTTATCTCAAGCCGATATAGAGCGAATGG 1280 Query 452457 TAGATGAAGCAGAAAAATT 452475 | | || ||||| || || Sbjct 1279 TGGCAGACGCAGAGAAGTT 1261 >seq18205 Length=6455 Score = 192 bits (212), Expect = 2e-43 Identities = 465/698 (67%), Gaps = 12/698 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 || |||||||||||| | || ||||| | || ||||| || || | ||| ||||||| Sbjct 5450 GCGATTGGAATTGATTTGGGCACCACATACTCGTGTGTTGGGGTATGGCAACATGGAAAC 5391 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || || || || || || ||||| || || ||||| ||||||| || || ||| Sbjct 5390 GTGGAGATCATTGCTAACGACCAGGGCAATCGCACTACCCCTTCATATGTCGCGTTCACG 5331 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAAA 451092 || |||| | ||| | || | || || || | | | | | |||| | | | || Sbjct 5330 GACACAGAGCGGCTTATCGGCGATGCAGCCAAGAACCAGGTTGCTCTCAA-TCCTACCAA 5272 Query 451093 CACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAA 451152 ||| || | |||||| || || || || ||||| | || ||| || | | ||| | Sbjct 5271 CACGGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTTTGACGACTCCAAGATTCAACA 5212 Query 451153 AGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGT 451212 || | || || | | | || | ||| || | ||||| || | || ||||| Sbjct 5211 GGACATGCAACACTGGCCCTTCAAAGTTATCAATGAATACGGAAAACCTAAGATCCAAGT 5152 Query 451213 AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATC--TATGGTTCTT 451270 ||| |||||| || | |||| || || || |||||||| || | |||||||||| Sbjct 5151 TGATTTTAAAGGAGAGGCGAAAAAATTCGCCCCCGAAGAAAT--CAGCAGTATGGTTCTT 5094 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || || ||||| |||| ||| || ||| | || | | || ||||||||| || Sbjct 5093 ACAAAGATGAAGGAAATAGCGGAGGCTTATCTGGGAACGCAGGTGCGTGATGCAGTCATC 5034 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| |||||||| ||||| || | ||||| || || ||||||||||| ||| ||| Sbjct 5033 ACTGTACCCGCTTACTTCAACGACTCTCAACGCCAGGCTACTAAAGATGCGGGAGCTATC 4974 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 || || | || || | |||||||| || ||||| ||||| || || || || || || Sbjct 4973 GCAGGCCTCAACGTCTTGCGAATTATCAACGAACCCACAGCTGCCGCACTGGCCTACGGT 4914 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | || ||| | || |||| ||| | ||| |||||||| | || || || Sbjct 4913 CTTGATAA---AAACCTTAAAGGAGAACGAAACGTGTTAATATTTGATCTCGGCGGGGGC 4857 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCAACC 451567 || ||| ||| | ||| | || || || || | |||||||||| || || || Sbjct 4856 ACATTTGACGTCTCTATTCTTACCATCGATGAGGGATCGTTATTTGAAGTGAAAGCGACT 4797 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || ||||| ||||| ||||| | ||||| Sbjct 4796 GCCGGCGACACGCATCTCGGAGGCGAAGACTTCGATAA 4759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974890053512084