Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq10663 421 5e-112 seq18205 320 1e-81 seq2102 95.1 9e-14 seq25548 86.0 5e-11 >seq10663 Length=11193 Score = 421 bits (466), Expect = 5e-112 Identities = 985/1470 (67%), Gaps = 22/1470 (1%) Strand=Plus/Plus Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 ||||| | || ||||| ||||| |||||||| || || || |||||||| || || | Sbjct 1372 ACATTTAATATTCCATTCGCATCTAAATCAAAGGTAACGTCTATTTGAGGAACACCACGT 1431 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 |||| || || || || ||||| ||||| |||| ||| || |||||||| | | Sbjct 1432 GGAGCTGGCGGTATACCCGTCAAATCGAATGTCCCCAATAAATTGTTGTCTTTAGTCATT 1491 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || ||| || || | | ||| ||||| ||| ||| ||||| || | || ||||| Sbjct 1492 GCTCTTTCTCCTTCATACACTTGTATAGTGACTGCAGGCTGATTGTCAGCGTACGTTGTG 1551 Query 517445 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 517504 ||| | ||| | ||| || || ||| | | |||| ||| | ||||| ||||||| Sbjct 1552 AATGTTTGGGAATGTTTGCAGGGTATTTTAGCATTTCGATCTACTATATTTGTCATAACT 1611 Query 517505 CCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 517564 || || || || |||| ||| || || | |||||| ||||| || || | || | ||| Sbjct 1612 CCTCCAGCCGTCTCTATACCTAGTGACAAAGGAGTCACATCCACCAGCAAAACGTCTTGG 1671 Query 517565 AGTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 517622 | || || ||||| | || || |||||||| |||| ||||| || ||||||| Sbjct 1672 ATCTTAGAAT--GTTTGTCGCCACTTAGTATAGCTGCCTGAACTGCAGCTCCGTATGCAA 1729 Query 517623 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 517682 | ||||| || ||||| | || | ||| || ||||| |||||||| ||| || |||| Sbjct 1730 CGGCTTCGTCTGGATTTATAGATAAATTGAGCTTTTTTCCATTGAAGAAAGTTTGCAGAA 1789 Query 517683 GTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 517741 | | || | || ||||| || | || || |||||||| || || |||| | || Sbjct 1790 GG-GACTGGATTTTTGGAATCCGTGTCGAGCCCCCAACTAACACGATGTCATTAAT-TGA 1847 Query 517742 GAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAA 517800 | ||||| | ||| | || | | | ||||| || || || | | | || ||| Sbjct 1848 ATTCTTATCTAATTTAGCGTCTTTAAGAGCCTTTTCTACTGGATCTAAAGTTGTTCGAAA 1907 Query 517801 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 517860 || || | | || || || ||| | ||||||| || | || |||| || || Sbjct 1908 TAAATCAGCATTCAGCTCCTCAAATCTTGCTCTAGAAACTCTTGAATAGAAATCTATGCC 1967 Query 517861 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 517920 |||| | |||| |||| ||| || ||| || || |||||| |||| || ||||| Sbjct 1968 TTCGTATAAAGCGTCAATTTCGATGTTAGCTTCCGTACTAGAAGAAAGTGTGCGCTTAGC 2027 Query 517921 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA-TCTGTTT 517979 | || |||||| || || | |||| ||||||| | | || | | ||| | | Sbjct 2028 CCTCTCTGCTGCTGTTCTGAGGCGGCGTAGCGCTTTTGA-GTTAGAATGGAGGTCTTTCT 2086 Query 517980 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 518039 ||| |||||| || || || ||| | | | | || || || | ||||| ||||| | Sbjct 2087 TATGTTTTCTTTTAAACTCATCAGCTAAGAAGTTGACTAGGCGGCTGTCAAAGTCTTCTC 2146 Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTCAAGAG 518096 | || | | ||||| ||| | || | | | || | ||||| ||| || || | Sbjct 2147 CGCCGAGATGAGTATCTCCAGCAGTTGATTTGACCTCAAAAAGAGATCCTTCGTCGATGT 2206 Query 518097 ACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 518156 ||| | | |||||| ||| || || || | ||||||||| || || ||| | || Sbjct 2207 TCAATATGGAAACATCAAAGGTACCGCCGCCTAAATCAAAAATCAGAACGTTCCTCTCAC 2266 Query 518157 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 518216 | | |||||||| | || || || || || || ||||| ||||| || || |||| Sbjct 2267 CTTTTAAATTTTTATCTAAGCCGTAAGCCAATGCTGCTGCAGTAGGTTCGTTTATGATTC 2326 Query 518217 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 518276 | |||||| || || ||||| | || |||||||| || ||||||| ||| || |||| Sbjct 2327 GAAGAACATTTAGTCCGGCAATAGTCCCAGCATCTTTTGTTGCTTGTCGTTGAGAGTCGT 2386 Query 518277 TAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTG 518336 |||| || |||||||| || ||||| || | | |||| | || | ||| | || Sbjct 2387 TAAAGTAGGCAGGAACTGTGATAACCGCCTTACTTACGGATGACCCCAAATACGATTCTG 2446 Query 518337 CCGTTTGTTTCATTTTACTTAAAATCATTGATGAA-ATTTGTTCTGGGGAATATTGCTTG 518395 |||| | ||||||||| ||| || ||| | || |||| ||| || | | | | || Sbjct 2447 CCGTCTCTTTCATTTTTATTAGAACCAT-GCTGCTTATTTCTTCAGGTGCAAAACGTTTA 2505 Query 518396 GA--TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 518453 | ||| ||| || | |||| | | |||||| || |||| | ||||||| Sbjct 2506 GTCTTTCCTTT--ATGAGTAACTTGTATTTTTGGTTTCCCACTTTCATTTACTACTTTAA 2563 Query 518454 ATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 518513 | ||||| | ||| | ||| || | | | |||| | | ||||| |||| | Sbjct 2564 AAGGCCAATGTTTTAGGTCTTGCTGTATTTTAGGATCATCGTATTTCCTACCTATTAGCC 2623 Query 518514 GTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTC 518573 | ||||| ||||| | || || |||| || | ||| | || | ||| || || |||| Sbjct 2624 GCTTTGCGTCAAATACTGTGTTAATTGGGTTTAAGGCAACCTGGTTTTTCGCCGCGTCTC 2683 Query 518574 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 518633 |||| || |||| || || || || | ||| ||||| || || || | ||| ||||||| Sbjct 2684 CAATTAGGCGTTCAGTATCGGTGAAGGCAACGTATGACGGTGTGGTTCTATTCCCTTGAT 2743 Query 518634 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 518693 ||||||| || || || || ||||| | ||||| ||||| |||||| | | ||||| | Sbjct 2744 CATTCGCTATGATGTCCACATTACCGTGCTGCCACACACCGACACAAGAATATGTTGTAC 2803 Query 518694 CTAAATCAATACCAATAGCA---ATTTTAT 518720 |||||||||| || || ||| ||||||| Sbjct 2804 CTAAATCAATGCCGATTGCAGGCATTTTAT 2833 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/226 (69%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 322150 GATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACGTTACC 322209 ||| |||| || |||||||| || || || | ||||| ||| ||| | ||||| | Sbjct 2202 GATGTTCAATATGGAAACATCAAAGGTACCGCCGCCTAAATCAAAAATCAGAACGTTCCT 2261 Query 322210 ACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGG 322269 || |||| ||| ||| || ||| ||||| || | ||||||||||| || Sbjct 2262 CTCACCTTTTAAATT---TTTATC------TAAGCCGTAAGCCAATGCTGCTGCAGTAGG 2312 Query 322270 TTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTG 322329 ||| || || ||| |||||||| || || ||||| | ||| ||| |||||||| Sbjct 2313 TTCGTTTATGATTCGAAGAACATTTAGTCCGGCAATAGTCCCAGCATCTTTTGTTGCTTG 2372 Query 322330 TCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTA 322375 || || | ||| ||||| || || || || || ||||| || ||| Sbjct 2373 TCGTTGAGAGTCGTTAAAGTAGGCAGGAACTGTGATAACCGCCTTA 2418 >seq18205 Length=6455 Score = 320 bits (354), Expect = 1e-81 Identities = 967/1472 (66%), Gaps = 31/1472 (2%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| || || |||||||| || ||||| | ||| || ||||| || || | || || Sbjct 3994 GCAGAAACGTTTAGAATACCGTTCGCATCGAGATCGAACGTGACGTCGATCTTGGGCACA 4053 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | |||| |||||||| || | | ||| || || | || || ||||| Sbjct 4054 CCGCGAGGAGCGGGTGGGATACCGGTGAGGTCAAAACGGCCGAGCATGTTGTTGTCTTTG 4113 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || | | ||| || |||||| | | ||||| || ||| | | || || || ||| || Sbjct 4114 GTCATTGCTCGCTCGCCCTCGTACACCTGGATGGTGACTGCGGGCTGGTTGTCCGAAAAA 4173 Query 517439 GTTGTAAATACTCTGG-ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 || |||||| ||||| ||| | ||||| ||| | | ||| || ||||| || || || Sbjct 4174 GTCGTAAATG-TCTGGGATTGCGTGCAAGGTATTTTGGCGTTCCTTTCAATGATCTTCGT 4232 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 ||| | ||| || || || || | || ||||| | || | |||||| ||||| | | Sbjct 4233 CATGACACCTCCAGCCGTCTCGATGCCGAGAGACAACGGCGCGACATCCACTAGTAATAC 4292 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 517617 || ||||| ||| || || ||| | ||||| || || | ||||| || || Sbjct 4293 ATCTTGAATTTTGCTATGTTGTTCGCCACTTAATATAGCAGCCTGTACCGCAGCCCCGTA 4352 Query 517618 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 517677 || || || || || ||||| | | || ||||| |||||| || || ||| Sbjct 4353 AGCCACCGCCTCGTCTGGATTGATGGAGAGGTTCAGTTTCTTACCACAAAAGAAGTTTTG 4412 Query 517678 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 517737 || | | | || ||| ||||| |||| || ||||| || | ||||| || || | Sbjct 4413 TAGCATGTTTTGTATCTTGGGAATTCGAGTAGAACCTCCGACGAGTACAACATCGTGGAT 4472 Query 517738 CTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTC 517796 | | | || |||| |||| |||| |||| |||| || || || |||||| | | Sbjct 4473 G-GCGCTCTTGTCCATCTTTGCATCCTTTAAAGCTTTCTCCACTGGCTCAAGAGTACCAC 4531 Query 517797 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TC 517854 |||| || ||| | |||||| || |||||| | || | | | || || || Sbjct 4532 GGAACAGATCGGAATTTAATTCTTCAAACCGAGCTCTCGAAACTTT--CGTGTAGAAGTC 4589 Query 517855 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 |||||||||| ||| | || | || ||||| | || || || || | || || Sbjct 4590 AATTCCTTCGTACAGCGCGTCTATCTCTATCGTTGCTTCCGTGCTCGATGACAATGTGCG 4649 Query 517915 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 517974 ||| || ||||| || || | ||| | |||| ||| | | | | || Sbjct 4650 TTTTGCTCGTTCGGCAGCAGTACGTAGCCGACGTAGAGCTCTGGAGTTACCACGTATGTC 4709 Query 517975 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 518034 | | |||||||| | ||| || || ||| | | | | ||||| | ||||| || || Sbjct 4710 TTTCTTATATTTGCGCTTAAATTCATCAGCCAAGTAATTGACAAGTCTGTTATCGAAGTC 4769 Query 518035 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTC 518091 ||| ||||| | | || | || | || ||| | |||| || | ||| || || Sbjct 4770 TTCGCCTCCGAGATGCGTGTCGCCGGCAGTCGCTTTCACTTCAAATAACGATCCCTCATC 4829 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 | | | || || || ||| || || || || | |||||| || | ||| | | Sbjct 4830 GATGGTAAGAATAGAGACGTCAAATGTGCCCCCGCCGAGATCAAATATTA--ACA--CGT 4885 Query 518152 TTCTTTGTCTT----GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 518207 ||| || || | |||||||||||||||| || || | || ||||| || ||||| | Sbjct 4886 TTCGTTCTCCTTTAAGGTTTTTATCAAGACCGTAGGCCAGTGCGGCAGCTGTGGGTTCGT 4945 Query 518208 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 518267 | ||||||| ||| || || || || || || ||| ||||||||||| || || | || Sbjct 4946 TGATAATTCGCAAGACGTTGAGGCCTGCGATAGCTCCCGCATCTTTAGTAGCCTGGCGTT 5005 Query 518268 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATAT 518327 | || ||||| || || || || ||||| || || |||||| || | | || | || Sbjct 5006 GAGAGTCGTTGAAGTAAGCGGGTACAGTGATGACTGCATCACGCACCTGCGTTCCCAGAT 5065 Query 518328 AAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCAT--TGATGAAATTTGTTCTGGGGA 518385 |||| || ||| ||||| || | | || ||| || ||| ||| ||| |||| Sbjct 5066 AAGCCTCCGCTATTTCCTTCATCTTTGTAAGAACCATACTGCTGA--TTTCTTCGGGGGC 5123 Query 518386 ATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTATTACCAA--CATT 518442 ||| || | || ||| | || | |||| | | ||||| | | | |||| Sbjct 5124 GAATTTTTTCGCCTCTCCTTTAAAATCA-ACTTGGATCTTAGGTTT--TCCGTATTCATT 5180 Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTC 518501 |||||||| || ||||||| || ||| || ||||| ||| | ||| | ||| | | Sbjct 5181 GATAACTTTGAAGGGCCAGTGTTGCATGTCCTGTTGAAT-CTTGGAGTCGTCAAACTTGC 5239 Query 518502 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATT 518561 || || ||||| ||||||||||| | || ||||| ||||| | ||| | || | | Sbjct 5240 GGCCGATCAATCGCTTTGCATCAAACACCGTGTTGGTAGGATTGAGAGCAACCTGGTTCT 5299 Query 518562 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 518621 |||||||||| || || || | ||||| || || || | |||||||| || || |||| Sbjct 5300 TGGCTGCATCGCCGATAAGCCGCTCTGTGTCCGTGAACGCGACATATGAAGGGGTAGTGC 5359 Query 518622 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 518681 |||| || || || || ||||| || || || || |||| ||||||||| || ||||| Sbjct 5360 GATTGCCCTGGTCGTTAGCAATGATCTCCACGTTTCCATGTTGCCATACCCCAACACACG 5419 Query 518682 TAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | || || || |||||||| ||||| ||| Sbjct 5420 AGTATGTGGTGCCCAAATCAATTCCAATCGCA 5451 >seq2102 Length=18217 Score = 95.1 bits (104), Expect = 9e-14 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 671534 GTTGAAGGAAAAAGAATTCAAATCAGATTCAATGGTAGAACACTTCCAATGTTCCCTAAA 671593 ||||||||||| | |||| || | || | |||||| | ||| ||| ||| Sbjct 15566 GTTGAAGGAAAGCGTATTCCGTTCGGTTTTCGTAAAAGAACATTGCCACATTTCATCAAA 15507 Query 671594 TTCGATGACAGTGCATTTTCCAGAGGTTTTTGTCGAAA-TTCTTTTATTGAGGGTCTTGG 671652 |||| || || || ||||||||||| ||||||| ||| | ||| || |||| Sbjct 15506 GACGATTACGGTCCAGAATCCAGAGGTTTC-GTCGAAAATTCATACCTTGCCGG-CTTGA 15449 Query 671653 -ACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTA 671711 ||| | ||| |||| ||||| | |||| ||||||||||||| | ||| |||| ||| Sbjct 15448 CACCCTCTGAGTTTTATTTCCACGCTATGGGAGGTCGTGAAGGTCTCATTGATACCGCTG 15389 Query 671712 TTAAAACTGCTGATACTGGTTATATTCA 671739 | ||||||||||| |||||||| ||||| Sbjct 15388 TAAAAACTGCTGAAACTGGTTACATTCA 15361 >seq25548 Length=6481 Score = 86.0 bits (94), Expect = 5e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 635440 ATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAA 635499 |||||| ||||| | || |||||||| |||||||||||||| ||| |||| ||||| Sbjct 5531 ATGTACGTTAATTCTTACTGAGGGAGACTCAGCTAAAACATTGGCTGTGTCGGGTCTCGG 5590 Query 635500 TGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAG 635559 ||| | ||||||||| | ||||| || ||||| | | || |||| || || || || Sbjct 5591 TGTGGTGGGAAGAGATCACTATGGCGTATTCCCTTTAAAGGGTAAACCGTTAAACGTAAG 5650 Query 635560 GGATGCT 635566 || ||| Sbjct 5651 AGACGCT 5657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779198576950438