Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq10663 376 3e-99 seq18205 354 1e-92 >seq10663 Length=11193 Score = 376 bits (416), Expect = 3e-99 Identities = 1064/1617 (66%), Gaps = 52/1617 (3%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| || |||| || || ||| ||||| || || || ||| ||| Sbjct 1246 TCATCTTCGCTCCTAAACTTCTCTGCGTCTGCCACCATTCGCTCTATATCGGCTTGAGAT 1305 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTC 6687 || | || |||||||| |||| || || |||| ||| | | | || |||| Sbjct 1306 AAACGACCTTTATCATTTTTAATTACTATGTTCTTCGACTTTCCGCTATTG-TTCTCTTT 1364 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| ||||| || || ||||| ||||| | ||| || | || | ||||| || Sbjct 1365 AGCGGAAACATTTAATATTCCATTCGCATCTAAATCAAAGGTAACGTCTATTTGAGGAAC 1424 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | || |||||||| ||||| ||||| || | |||| |||| || | Sbjct 1425 ACCACGTGGAGCTGGCGGTATACCCGTCAAATCGAATGTCCCCAATAAATTGTTGTCTTT 1484 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 | | | | ||| |||||||| |||| || || || ||||| ||||| || Sbjct 1485 AGTCATTGCTCTTTCTCCTTCATACACTTGTATAGTGACTGCAGGCTGATTGTCAGCGTA 1544 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||||| ||| |||| | || | || || | | ||||| | | || Sbjct 1545 CGTTGTGAATGTTTGGGAATGTTTGCAGGGTATTTTAGCATTTCGATCTACTATATTTGT 1604 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| || || || || | || || |||| ||| ||||| |||| || || | Sbjct 1605 CATAACTCCTCCAGCCGTCTCTATACCTAGTGACAAAGGAGTCACATCCACCAGCAAAAC 1664 Query 6988 GTCTTGAAC---AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 |||||| | ||| | || | ||| ||| || || || || || | || || Sbjct 1665 GTCTTGGATCTTAGAATGTTTGTCGCCAC---TTAGTATAGCTGCCTGAACTGCAGCTCC 1721 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 |||||| || || || || || || || | | ||| || | ||| || || || || Sbjct 1722 GTATGCAACGGCTTCGTCTGGATTTATAGATAAATTGAGCTTTTTTCCATTGAAGAAA-- 1779 Query 7105 CGATAACATTTGT---TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTC 7161 | | || | || ||||| || || |||||||| || || || || ||||| || Sbjct 1780 -GTTTGCAGAAGGGACTGGATTTTTGGAATCCGTGTCGAGCCCCCAACTAACACGATGTC 1838 Query 7162 ATTCACTTTCGATT--TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 ||| | || ||| |||| | || | |||| ||| | ||||| || || || | | Sbjct 1839 ATTAA--TTGAATTCTTATCTAATTTAGCGTCTTTAAGAGCCTTTTCTACTGGATCTAAA 1896 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 | | || || || || | ||| |||||||| | ||| | | || || |||| Sbjct 1897 GTTGTTCGAAATAAATCAGCATTCAGCTCCTCAAATCTTGCTCTAGAAACTCTTGAATAG 1956 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 ||||| | ||| |||||||| | |||||||| ||| | | || | | ||||| | Sbjct 1957 AAATCTATGCCTTCGTATAAAGCGTCAATTTCGATGTTAGCTTCCGTACTAGAAGAAAGT 2016 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || | ||| || |||| | || || || || | |||| ||| Sbjct 2017 GTGCGCTTAGCCCTCTCTGCTGCTGTTCTGAGGCGGCGTAGCGCTTTTGAGTTA---GAA 2073 Query 7400 ---ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTC 7453 | |||||||||||||| | ||||||||| |||| ||| || || ||| | || Sbjct 2074 TGGAGGTCTTTCTTATGTTTTCTTTTAAACTCATCAGCTAAGAAGTTGACTAGGCGGCTG 2133 Query 7454 GAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATA 7513 || || ||||| || || | || ||||| || || || | |||||| ||||| | | Sbjct 2134 ---TCAAAGTCTTCTCCGCCGAGATGAGTATCTCCAGCAGTTGATTTGACCTCAAAAAGA 2190 Query 7514 CCTCCTTCA---ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 |||||| ||||| || | ||||||||||| ||||| || || | |||||||| Sbjct 2191 GATCCTTCGTCGATGTTCAATATGGAAACATCAAAGGTACCGCCGCCTAAATCAAAAATC 2250 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || |||||| | || | | | || ||||| | ||||| || | || || || || Sbjct 2251 AGAACGTTCCTCTCACCTTTTAAATTTTTATCTAAGCCGTAAGCCAATGCTGCTGCAGTA 2310 Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 ||||| || || || |||||| || || || |||||||| | |||||||| || ||| Sbjct 2311 GGTTCGTTTATGATTCGAAGAACATTTAGTCCGGCAATAGTCCCAGCATCTTTTGTTGCT 2370 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 |||||||| || |||||||||||||| || || || | |||| | | |||| | | Sbjct 2371 TGTCGTTGAGAGTCGTTAAAGTAGGCAGGAACTGTGATAACCG----CCTTACTTACGGA 2426 Query 7751 ----CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG-AAATCT 7805 || | ||||||||| || | ||||||||||| | |||||||| | || || | Sbjct 2427 TGACCCCAAATACGATTCTGCCGTCTCTTTCATTTTTATTAGAACCAT-GCTGCTTATTT 2485 Query 7806 CTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG 7865 |||||| ||||| |||| || | || ||| | ||||| || | ||||| | Sbjct 2486 CTTCAGGTGCAAAACGTTTAGTCTTTCCTTTATGAGTAACTTGTATTTTTGGTTT---CC 2542 Query 7866 CAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG 7925 || | | || ||| | | ||||| ||| | || | || | | | || Sbjct 2543 CACTTTCATTTACTACTTTAAAAGGCCAATGTTTTAGGTCTTGCTGTATTTTAGGATCAT 2602 Query 7926 AAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTG 7985 | || || || || || |||||||| ||||| |||||||| | ||||| | ||| Sbjct 2603 CGTATTTCCTACCTATTAGCCGCTTTGCGTCAAATACTGTGTTAATTGGGTTTAAGGCAA 2662 Query 7986 TTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACG 8045 ||||| ||||||||||| || || || |||||| || || || || || ||||| | Sbjct 2663 CCTGGTTTTTCGCCGCGTCTCCAATTAGGCGTTCAGTA---TCGGTGAAGGCAACGTATG 2719 Query 8046 ATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 | || || |||| ||||||||| || ||||| || || || || ||| ||||| | Sbjct 2720 ACGGTGTGGTTCTATTCCCTTGATCATTCGCTATGATGTCCACATTACCGTGCTGCCACA 2779 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATTTTAT 8162 | ||||| || ||||| ||||| ||||||||||| |||||||| || |||||||| Sbjct 2780 CACCGACACAAGAATATGTTGTACCTAAATCAATGCCGATTGC---AGGCATTTTAT 2833 >seq18205 Length=6455 Score = 354 bits (392), Expect = 1e-92 Identities = 832/1239 (67%), Gaps = 35/1239 (3%) Strand=Plus/Plus Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||| || || |||| || ||||||| || | || |||| ||||| Sbjct 4231 GTCATGACACCTCCAGCCGTCTCGATGCCGAGAGACAACGGCGCGACATCCACTAGTAAT 4290 Query 6986 AGGTCTTGAACA--GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCC 7043 | ||||||| | | ||| ||| || |||| || || || || |||| |||| Sbjct 4291 ACATCTTGAATTTTGCTATGTTG--TTCGCCACTTAATATAGCAGCCTGTACCGCAGCCC 4348 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 |||| || |||||||| || || || || | ||||||| ||||| ||| | | Sbjct 4349 CGTAAGCCACCGCCTCGTCTGGATTGATGGAGAGGTTCAGTTTCTTACCACAAAAGAAGT 4408 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 || ||| | ||| || || || ||||| || || || ||||| | || | || | Sbjct 4409 TTTGTAGCATGTTTTGTATCTTGGGAATTCGAGTAGAACCTCCGACGAGTACAACATCGT 4468 Query 7164 TCACTTTCGAT-TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 | | || | || || ||||||| || | | ||| || || || || | | Sbjct 4469 GGA-TGGCGCTCTTGTCCATCTTTGCATCCTTTAAAGCTTTCTCCACTGGCTCAAGAGTA 4527 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 |||||||| || | | ||| ||||| || || | | || || ||||| Sbjct 4528 CCACGGAACAGATCGGAATTTAATTCTTCAAACCGAGCTCTCGAAACTTTCGTGTAGAAG 4587 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACG 7340 |||| || ||||| | || || || || || |||| || |||| |||| || || | Sbjct 4588 TCAATTCCTTCGTACAGCGCGTCTATCTCTATCGTTGCTTCCGTGC--TCGATGACAATG 4645 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 | || ||||| || || || || |||| ||||| || || | | |||||| | Sbjct 4646 TGCGTTTTGCTCGTTCGGCAGCAGTACGTAGCCGACGTAGAGCTCTGGAGTTACCACGTA 4705 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGA 7460 | |||||||||| ||| || ||||| || |||| |||| | ||||| ||||| Sbjct 4706 TGTCTTTCTTATATTTGCGCTTAAATTCATCAGCCAAGTAATTGACAAGTCTGTTATCGA 4765 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCT 7516 | ||||| || || | || || || || || |||||||| |||||||| ||| ||| Sbjct 4766 AGTCTTCGCCTCCGAGATGCGTGTCGCCGGCAGTCGCTTTCACTTCAAATAACGATCCCT 4825 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | | | ||| | | | || || ||||| || || || || || ||||| || | ||| Sbjct 4826 CAT-CGATGGTAAGAATAGAGACGTCAAATGTGCCCCCGCCGAGATCAAATATTAACACG 4884 Query 7577 TTCGTATCGTCGTCTTT----GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || |||| || || ||| ||||| |||||||| || | || || || || || Sbjct 4885 TT----TCGTTCTCCTTTAAGGTTTTTATCAAGACCGTAGGCCAGTGCGGCAGCTGTGGG 4940 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 ||| || ||||| || ||||| ||| ||||| || |||| | |||||||||| || || | Sbjct 4941 TTCGTTGATAATTCGCAAGAC-GTTGAGGCCTGCGATAGCTCCCGCATCTTTAGTAGCCT 4999 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | ||||| || ||||| ||||| || || || || | ||| || || || | | | | Sbjct 5000 GGCGTTGAGAGTCGTTGAAGTAAGCGGGTACAGTGATGACTGCATCACGCACCTGCGTTC 5059 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT--CGATGAAATCTCTTC 7809 | ||||| | ||||| || || ||||| || ||||||||||| | || || ||||| Sbjct 5060 CCAGATAAGCCTCCGCTATTTCCTTCATCTTTGTAAGAACCATACTGCTG--ATTTCTTC 5117 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || || | ||||| || || ||||||||||||| ||| | ||||| |||| | Sbjct 5118 GGGGGCGAATTTTTTCGCCTCTCCTTTAAAATCAACTTGGATCTTAGGTTT-TCCGTA-- 5174 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 | |||||| || | | ||| | || ||| || | ||| | || ||| ||| Sbjct 5175 TTCATTGATAACTTTGAAGGGCCAGTGTTGCATGTCCTGTTGAATCTTGGAGTCGTCAAA 5234 Query 7930 CTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTG 7989 ||| | ||||| | |||||||||||||| || ||||| | || || | || || Sbjct 5235 CTTGCGGCCGATCAATCGCTTTGCATCAAACACCGTGTTGGTAGGATTGAGAGCAACCTG 5294 Query 7990 GTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGG 8049 |||||| || || || |||||||| || || | ||||| |||||||| || || || Sbjct 5295 GTTCTTGGCTGCATCGCCGATAAGCCGCTC---TGTGTCCGTGAACGCGACATATGAAGG 5351 Query 8050 GGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCC 8109 ||| || ||||| || |||||||| ||||| || || ||| | | |||||| || || Sbjct 5352 GGTAGTGCGATTGCCCTGGTCGTTAGCAATGATCTCCACGTTTCCATGTTGCCATACCCC 5411 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || ||||| || || || || |||||||| || || || Sbjct 5412 AACACACGAGTATGTGGTGCCCAAATCAATTCCAATCGC 5450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634873006867320