Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq24087 172 4e-38 seq26882 86.0 5e-12 >seq24087 Length=8432 Score = 172 bits (190), Expect = 4e-38 Identities = 187/248 (75%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 7828 CGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCC 7887 || |||| || |||| |||||||| ||||| |||||||| || || | || ||| Sbjct 2145 CGCCTGCGCAGCTTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCC 2086 Query 7888 GAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGG 7947 ||||| ||||| | |||||| |||| ||||| | || ||||| |||||||||||||| Sbjct 2085 GAAGCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGC 2026 Query 7948 GGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGAT 8007 || ||||| || |||||| | |||| | ||||||||||| |||||||||||||| || Sbjct 2025 GGGCTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGAC 1966 Query 8008 AAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGGTAATTACTGAA 8067 ||||| || || | || |||||||| || || || |||||||| || || || Sbjct 1965 CGGTGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAG 1906 Query 8068 GCGTGCGC 8075 |||||||| Sbjct 1905 GCGTGCGC 1898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 7603 AACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGCGCGTTTTGTAAAGTGGAA 7662 || || || |||||| |||| || | || || || || ||||||||||||||||| ||| Sbjct 2430 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 2371 Query 7663 ATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCATCGGAAGTGGGCACCGCAG 7722 || ||| ||||| | || |||||||| | |||||||| | | ||||| || ||| Sbjct 2370 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 2311 Query 7723 TGTCCGTTTCTGCG 7736 || || || ||||| Sbjct 2310 TGCCCCTTCCTGCG 2297 >seq26882 Length=35402 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 8991 TTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAA-G 9049 ||| ||||| || || |||||||| || || || || | || || || | | || | Sbjct 26773 TTATTTAGTTCCTGTAGACCCAAAACCACCTTCCCCTCTTTTTGTTTCTGA--TAGATTG 26716 Query 9050 T-AACCTCTACCAG-TGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTC 9107 | ||| || || | | |||| || || ||| |||||| || | ||||||||| || || Sbjct 26715 TCAACTTCAACTATATATGGG-TAGAAAATTCTTTCACATATCAGTTGAGCAATTCTATC 26657 Query 9108 CCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACC 9167 || || || || |||| ||| |||||||||||| | ||||||||| | ||| || Sbjct 26656 ACCTTTTTTAACTGCAAAATCTTCACTGGAATGATTGAATAACACCACTCCAATGTTTCC 26597 Query 9168 CCTGTAATCCTCATCGATCACACCAGC 9194 | ||| || ||||| || |||||||| Sbjct 26596 ACGGTAGTCTTCATCTATGACACCAGC 26570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380785677680529