Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_019513.1 Length=45552 Score E Sequences producing significant alignments: (Bits) Value seq18169 558 1e-154 >seq18169 Length=2751 Score = 558 bits (618), Expect = 1e-154 Identities = 1152/1688 (68%), Gaps = 73/1688 (4%) Strand=Plus/Minus Query 28448 TGCTTGATAGTTATATCTATTATCTTGTGCAATAACTCGTCTGTTAAGTGCTTGTTGAAT 28507 ||||||||| ||| || | |||||||| ||| | |||| | || | |||||||||||| Sbjct 1685 TGCTTGATAATTAAATTTGTTATCTTGCGCACGTAATCGTTTATTCAATGCTTGTTGAAT 1626 Query 28508 TTGTACCATATCTTTTATTTCATTGCTGAAAGACACTTCATCTATTGCGTTTACAAATGG 28567 ||| ||||| |||||||||||||| ||||| ||||||||| | || | ||| || || Sbjct 1625 TTGAACCATGTCTTTTATTTCATTACTGAACGACACTTCAGCAATCGTATTTGTGAAAGG 1566 Query 28568 ATGTGACCTATCAAGTT----TAACAACCTTTAATTCAGTGTTATATCCCATTAATTCAT 28623 ||| ||| || ||| | ||||| ||||||||||||||| | ||||||||||| | Sbjct 1565 GTGT--CCTTTC--GTTATACTTACAACTTTTAATTCAGTGTTAAAGCCCATTAATTCGT 1510 Query 28624 GAACAAAAAATACGCTATCTCTTGGCTCTATTTTTTCATAACCTATATAATTAACATCTA 28683 | ||||||| || |||||||||| | || | ||||||| |||||||| || || Sbjct 1509 GCACAAAAATAACAGTATCTCTTGGTCCGATACTGTCATAACTGATATAATTCACGGTTA 1450 Query 28684 ATTCAGTCTTAGGAGTATCATTTATTTGCTTTTTTGCAAAT---TCTAACAGCTTATCCT 28740 |||| || ||||| || || | || ||| | | || || | |||| | || | | Sbjct 1449 ATTCTGTTTTAGGCGTGTCTTGTAATTGACTCATCGCCCATCTCTTTAACTGATTTACAT 1390 Query 28741 GTGTTTCGATATCTTCATTTGTTTGCGTATTAGCATATCGAATCCCAAACTGCTTTGCAC 28800 | ||| | |||||||| ||||| ||||| || | ||| ||| ||| || Sbjct 1389 TACT---GATTTGGTCATTTGTGACGGTATTTGCATAACGTAAACCATACTTCTTAGCT- 1334 Query 28801 TATCTGCGA--CGTAGTCGACAATTGCTTTGTATTGATTGCGACCTGAATTATCAGCAAT 28858 | | |||| | || || || ||||| ||| || |||| | |||||||||| Sbjct 1333 TGTG-GCGATACATATTCATAAACAGCTTTATATGCTTTATCGCCTGTAGTATCAGCAAT 1275 Query 28859 TAAATTTAAGACTGTTGATTTTTCAGTTCCAACATACATACAAGGCTTAGCTTTTTTATT 28918 ||||||||| || |||||||||||||| || |||| | | || ||| ||| | | || Sbjct 1274 TAAATTTAATACAGTTGATTTTTCAGTACCTGCATAAAACCTAGACTT--CTTATCTGTT 1217 Query 28919 TGAAGATATATCAATTCTATTTTTGGGGTCTTCTCCTAAAAATATCATTTCTAAAACGTG 28978 || | | || | | || || || ||| ||||| | ||| | | ||| Sbjct 1216 GGAGGTTT-----ATGCGCT-----GGATCATCACCTTTAAATACAAATTCAACAGTGTG 1167 Query 28979 CTTGCCTTTATCAATATTTTTTATTAAATCTATTGTTTCA---GACTGAACCGACTTAGC 29035 |||||| | | ||| ||||||| ||||||||| || ||| || ||||| Sbjct 1166 TCGTCCTTTAGACAAACCTTTCTTTAAATCAATTGTTTCACTTGA-TGAT--GATTTAGC 1110 Query 29036 AAAACAAGAAATT-TGCTTAATTTGCTTGCCGTCTAAAATCAACTTATATATTCCACCTT 29094 ||||||| | | | ||| || ||||| || | || | | | ||||||| Sbjct 1109 CCAACAAGATTTAGTCCCTAAACTG-TTGCCATCAACAAATGTTTCGAACAGTCCACCTA 1051 Query 29095 GAGAGCCCTTTTTTATTGTAAATCTAACTGTTTCATTACCATACTTGCA----ATCAAAG 29150 | || ||||| || ||| || || |||||||| ||| | || || |||| | Sbjct 1050 ATGGACCTTTTTTAATCGTATGTCGAAGTGTTTCATCGCCAAATTTACACGTAATCACAT 991 Query 29151 TTAATAGT--AGCTTTAGACCCAATTGTTTCGGTACGATAAGTACCTTCTTTTATAAAAC 29208 || || ||| || | |||||| || ||| ||| ||| ||| |||||| Sbjct 990 ACGATTGTTTAGCATTTGG------TGTTTCACTATAGTAACTACTTTCCTTTTTAAAAC 937 Query 29209 CATTTGAATATTTAATGTCAGTTGTTCTAATAGGATTATAATTTTTCTTTTC-CTCAGCT 29267 | |||||||| | | | | ||| |||||||| |||| |||||| |||| ||| | | Sbjct 936 TACTTGAATATGTCAGTTGTGGCGTTTTAATAGGACTATAGTTTTTCGTTTCACTC-GAT 878 Query 29268 GTATACTTTTTTCCAAAAACTTTTATAGCTGTTCTTAATTCCAATGTACTGACAGTTGCA 29327 | ||||||||| ||| | |||||||||||||||||| ||| || || || ||| |||| Sbjct 877 GAATACTTTTTGCCATATGCTTTTATAGCTGTTCTTAGTTCTAACGTGCTAACACTTGCT 818 Query 29328 GATACAGTATCAGTATTATATTGATATCGAATCACTTTCTCGCTTCTTTGATAAAATGTT 29387 || ||| |||| ||||||| || ||| || || || ||||| || ||| || ||| Sbjct 817 GAAACATTATCCGTATTATGTTTATAACGGATAACATTCTCTGTTGGTTGGTAGAATACA 758 Query 29388 TCAGGAGAATAAAAACCAATCTCTGTATCATTTGGGTAAATTATACAGCCAAACAGGTCT 29447 || ||||| || || || |||||| ||| |||| ||| | |||| | || Sbjct 757 TCTCTTTTGTAAAAGCCTATTTCATCATCATTAGGGAAAATAATATAATCAAATAATTCG 698 Query 29448 ACCGCTTCTTTACAGTATTCTAAGCCGTTTTTGTTACCTAATTCGTCAATCGGTACTTTT 29507 | | || || || | || |||||| ||| | ||| ||||| |||||| Sbjct 697 ATACCATCATTGATTGCCTCAATACCATTTTTGCCACCAAGTTCATCAATTTCTACTTT- 639 Query 29508 CGCT-TAAAATCTCCAATTATTTTATAGGTCATTTTGACCGAAGTTTTTTGATTTGCAAA 29566 | || |||| |||| ||||||||| | | |||| | | || |||||||| ||||| Sbjct 638 CTCTGTAAACGATCCATATATTTTATATTTGAATTTGTGCAATGTCTTTTGATTAGCAAA 579 Query 29567 TCCATATCTTAAGTACTCATCTAAAGAGTATTCTGGCGTTTTACCAGTTTCGCTACTGTC 29626 ||||| | || || || ||||| | ||| || || | ||||| | |||| Sbjct 578 CACATATTTCAAATATTCTTCTAACGTGTA------CGATTGAGTGGTTTC--TTCTGTT 527 Query 29627 G-----TCATCAAGCTTA---TTTGATTCCACTGAGTGATTTTGAAATTCATACATTATG 29678 | |||||| ||| |||||||| || | |||||||| |||||||||||| || Sbjct 526 GCACCCTCATCATCTTTACGGTTTGATTCAACATAATGATTTTGGAATTCATACATTGTG 467 Query 29679 TGATATGCCGTAACTTCAATAAAAACTTTATCACCTTCAACCTTTGGCGCTGTCTGCTTA 29738 |||| ||| ||||||||||| |||| ||| |||||| |||| || | ||| || ||| Sbjct 466 TGATGTGCGATAACTTCAATAGAAACGATATTACCTTCTGCCTTCGGGGTTGTTTGTTTA 407 Query 29739 ATTGTATATTTTTCACCATGATAAATTATGAAGTTTTCACAAATCAATAAATCAAAAACA 29798 || ||| |||| || ||| |||| || ||||| |||||||| || | ||| | || Sbjct 406 ATCACGTATGTTTCTCCTTGAAAAATGATAAAGTTCTCACAAATTAACATGTCATACTCA 347 Query 29799 AAACTATTATGAGTAGTTCTATAAACTGTAAAGGTGATGTACCTAGCTTCATTCAGTTCA 29858 |||| ||||| | | |||| | |||||| || || | | |||||||| | || Sbjct 346 AAACGATTATCACTTGTTCGGTTAACTGTGAATGTTAAAGAAGAGGCTTCATTTAACACA 287 Query 29859 TAATATTCTTTAAAAGAACCATAATCTACATCTAGTAAATTTTCACAAATCAATTCATTA 29918 | | ||||| ||| |||||||| ||| | ||||||||| || || || | | Sbjct 286 TTGTCGTCTTTGAAACCTCCATAATCAACACCACTTAAATTTTCGCATATTGTTTTCTCA 227 Query 29919 AAATCCATTACTGATAAATGATCATGATAATCCATTAAATCA-CCTACCTATAAATAAAA 29977 |||| ||| || | ||| || ||||| | || ||| |||| ||||||||||||||||| Sbjct 226 AAATTCATCACGGCTAAGTGGTCATGTTCATTCATGTTATCACCCTACCTATAAATAAAA 167 Query 29978 GGAAACTT-AAATGTAGTTTTAATATCACTGACGTCTCCTTTAATCTTAAATTCATTTTT 30036 || ||||| || | |||| | | | || ||||| || ||||||||||||||||| Sbjct 166 GGGAACTTGAACAACACTTTTTGT-GAAGTCACATCTCCCTTTATCTTAAATTCATTTTT 108 Query 30037 ACCTGGCGCTAATGTTATAATGCCTCTATTTGTATCAATTCCCACTCTATTTATATCTCG 30096 ||| ||||||||||| |||| ||||| || ||||| || || ||| | ||| || | Sbjct 107 ACCAGGCGCTAATGTAATAACACCTCTGTTGGTATCTATACCAACTTTGTTTTGGTCCCT 48 Query 30097 ATATGCAT 30104 ||| |||| Sbjct 47 ATAAGCAT 40 Score = 295 bits (326), Expect = 2e-75 Identities = 381/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Minus Query 27350 TATACTTGAAACGAACTAATGTATTCTCATTATTACCATTTAAGATAAAACTATAAATCC 27409 |||| ||||| ||||||||||| || | ||||| |||||| ||||| ||| |||| Sbjct 2744 TATATTTGAACCGAACTAATGTGTTTTGGTTATTGCCATTTTTAATAAATGAATATATCC 2685 Query 27410 ATAACTCATCATCAATATATCTATAACCGTTATGTGTACCATGACCCCCACCTACAATCA 27469 | | |||||||| ||||| | ||||| || |||||||| ||||| ||||| | || | Sbjct 2684 AAAGTTCATCATCTATATAACGGTAACCATTGTGTGTACCGTGACCACCACCAATAACAA 2625 Query 27470 ATGAGCTGTCTATAAATTGACCATTAGGTCTTAAACGACTTAGCATATAGCCATTATTTC 27529 ||| || |||||| |||| || || |||| ||| | | |||||||| || ||| || Sbjct 2624 GTGAACTATCTATATATTGCCCGTTTGGTCGTAATCTTGTGAGCATATATCCGTTACCTC 2565 Query 27530 TAGCTTGTGTCATGTATACTATGCCTGTTCTATTATCAAACCAGAAGGATTGCATTACTG 27589 ||||||||||||| || || || ||| ||| |||||||||||| || || ||||| |||| Sbjct 2564 TAGCTTGTGTCATATAGACAATACCTTTTCGATTATCAAACCAAAATGACTGCATAACTG 2505 Query 27590 CATTTGTAAGAGGTGCAAGTTCTGTCACAAATAAAAACTCTTGCTTATCAGGTTCAAAAC 27649 | ||||| | ||| || | |||||| || ||||| |||||||| ||||| |||||||| | Sbjct 2504 CGTTTGTTAAAGGCGCTAATTCTGTTACGAATAAGAACTCTTGTTTATCTGGTTCAAAGC 2445 Query 27650 GATACTCGATATCAAGAATTTCTTGTTTGGTCTTATT-TAATTCTCTTATAGTTTCCTCT 27708 |||| || | ||| | | ||||| | | ||| || || || | ||| ||| Sbjct 2444 GATATTCTAAATCTAATACTTCTTTAGTTG-CTTGTTGTACAGACGATAAAACTTCTTCT 2386 Query 27709 TTATTAATTTGAGTTTTGGTTTCCCAATCGTCTAAATGTTCTTTTAATGTGTCAAAGGTT 27768 |||| ||| || || || ||||| | | || ||||| ||||| ||||| | Sbjct 2385 TTATCAATATGCGTACGTTCTTGCCAATAATTGATATTATCTTTCAATGTTTCAAATTCT 2326 Query 27769 TCGCCGTTTACATTAACTCGAGCTTGAACAATCTCATTAGCACTGTTATTACGTGGTGC- 27827 ||||| | ||| |||| |||||| ||||||||||||||||| || |||||||| || Sbjct 2325 TCGCCAAACATATTCACTCTAGCTTGTACAATCTCATTAGCACTATTGTTACGTGGCGCT 2266 Query 27828 CACAACAA-GTGCGTTAATTTGACTTTGTAAAGATTTGTT 27866 ||| ||| | | | ||||| |||||||| |||||| Sbjct 2265 AACACCAATCTACCT--ATTTGGCTTTGTAAGTCTTTGTT 2228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145588204524364