Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq10663 237 1e-56 seq18205 217 1e-50 seq25548 105 4e-17 >seq10663 Length=11193 Score = 237 bits (262), Expect = 1e-56 Identities = 383/551 (70%), Gaps = 0/551 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||||| || ||||||||||| || || || |||||| | ||| ||||| | ||||| Sbjct 2823 TGCAATCGGCATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCACGGTAA 2764 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || || || || || ||||| ||||| |||||||| ||||| ||||| ||| | || || Sbjct 2763 TGTGGACATCATAGCGAATGATCAAGGGAATAGAACCACACCGTCATACGTTGCCTTCAC 2704 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || |||||||| || || ||| | || | ||| | || || |||| Sbjct 2703 CGATACTGAACGCCTAATTGGAGACGCGGCGAAAAACCAGGTTGCCTTAAACCCAATTAA 2644 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || | | || ||| | || | |||||| | | | || Sbjct 2643 CACAGTATTTGACGCAAAGCGGCTAATAGGTAGGAAATACGATGATCCTAAAATACAGCA 2584 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 || | |||||||||||||| || |||||| |||| |||||| | ||| ||| Sbjct 2583 AGACCTAAAACATTGGCCTTTTAAAGTAGTAAATGAAAGTGGGAAACCAAAAATACAAGT 2524 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | || ||| | ||||||| ||| |||| ||| |||| |||||| || Sbjct 2523 TACTCATAAAGGAAAGACTAAACGTTTTGCACCTGAAGAAATAAGCAGCATGGTTCTAAT 2464 Query 474688 CAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 ||||||||| | || || || ||| | || | |||| | | || || || || Sbjct 2463 AAAAATGAAAGAGACGGCAGAATCGTATTTGGGGTCATCCGTAAGTAAGGCGGTTATCAC 2404 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 ||||| || || ||||| || |||||||| |||||||| |||||||| || | ||||| Sbjct 2403 AGTTCCTGCCTACTTTAACGACTCTCAACGACAAGCAACAAAAGATGCTGGGACTATTGC 2344 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 || || |||||| | || || || || ||||| || ||||| ||| | ||||| || | Sbjct 2343 CGGACTAAATGTTCTTCGAATCATAAACGAACCTACTGCAGCAGCATTGGCTTACGGCTT 2284 Query 474868 TGATAAGAATT 474878 ||||| |||| Sbjct 2283 AGATAAAAATT 2273 Score = 183 bits (202), Expect = 2e-40 Identities = 538/820 (66%), Gaps = 22/820 (3%) Strand=Plus/Minus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGT 475424 |||| ||||||||| | ||||| || || ||||| ||||| | | || || | | Sbjct 2173 CAACTGCTGGAGATACTCATCTCGGCGGAGAAGACTTTGACAGCCGCCTAGTCAACTTCT 2114 Query 475425 GTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCT---TTCAACATCTGCTAAAGCAT 475481 | ||| || || || || ||| |||| || || ||| | || ||||| Sbjct 2113 TAGCTGATGAGTTTAAAAGAAAACATAAGAAAGACCTCCATTCTAACTCA---AAAGCGC 2057 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 || | || || ||||| || || | |||||||| | ||||||||| ||| || Sbjct 2056 TACGCCGCCTCAGAACAGCAGCAGAGAGGGCTAAGCGCACACTTTCTTCTAGTACGGAAG 1997 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGG 475601 ||| | ||| |||| || | | ||||| || |||| || | || | || | Sbjct 1996 CTAACATCGAAATTGACGCTTTATACGAAGGCATAGATTTCTATTCAAGAGTTTCTAGAG 1937 Query 475602 CTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAG 475661 | | |||||| || | | ||||| | ||| ||| ||| | || || || ||| | | Sbjct 1936 CAAGATTTGAGGAGCTGAATGCTGATTTATTTCGAACAACTTTAGATCCAGTAGAAAAGG 1877 Query 475662 TTCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 ||| | ||| ||||| | || || | ||| | |||| || || | || || || Sbjct 1876 CTCTTAAAGACGCTAAATTAGATAAGAATTCAATTA-ATGACATCGTGTTAGTTGGGGGC 1818 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT----AATGGTAAAAA 475776 || ||| | ||||||||||| | | | ||| || | ||| ||||| ||||| Sbjct 1817 TCGACACGGATTCCAAAAATCC----AGTCCCTTCTGCAAACTTTCTTCAATGGAAAAAA 1762 Query 475777 GTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGC 475836 | | ||| | | ||||||| || ||||| |||||||| |||||||| || || ||||| Sbjct 1761 GCTCAATTTATCTATAAATCCAGACGAAGCCGTTGCATACGGAGCTGCAGTTCAGGCAGC 1702 Query 475837 TATTTTATCAGGT--CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACT 475894 ||| || || ||| || | | | | || | ||| || || || || ||| Sbjct 1701 TATACTAAGTGGCGACAAACATTCTAAGATCCAAGACGTTTTG--CTGGTGGATGTGACT 1644 Query 475895 CCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAAT 475954 || | ||| ||||| | || || | |||||| ||||||| ||| | | || ||||| Sbjct 1643 CCTTTGTCACTAGGTATAGAGACGGCTGGAGGAGTTATGACAAATATAGTAGATCGAAAT 1584 Query 475955 ACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACT 476014 || || || |||||| | || || ||| | || || |||| ||||| | | Sbjct 1583 GCTAAAATACCCTGCAAACATTCCCAAACATTCACAACGTACGCTGACAATCAGCCTGCA 1524 Query 476015 GTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGA 476074 || || || ||| | | |||||| |||||| | | |||||||| || || | | || Sbjct 1523 GTCACTATACAAGTGTATGAAGGAGAAAGAGCAATGACTAAAGACAACAATTTATTGGGG 1464 Query 476075 ACTTTTAATCTTGAAGG-TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTAC 476133 || || || |||| || ||| || || ||||| | || ||||||||||| || ||||| Sbjct 1463 ACATTCGAT-TTGACGGGTATACCGCCAGCTCCACGTGGTGTTCCTCAAATAGACGTTAC 1405 Query 476134 TTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||| | ||||| ||||| || | |||||| | ||| Sbjct 1404 CTTTGATTTAGATGCGAATGGAATATTAAATGTTTCCGCT 1365 >seq18205 Length=6455 Score = 217 bits (240), Expect = 1e-50 Identities = 405/588 (69%), Gaps = 10/588 (2%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| ||||| |||||||| || || || ||| ||||| | || |||||| |||| || Sbjct 5451 TGCGATTGGAATTGATTTGGGCACCACATACTCGTGTGTTGGGGTATGGCAACATGGAAA 5392 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || || || ||||| || ||||| || ||| | || || || |||||||| | || || Sbjct 5391 CGTGGAGATCATTGCTAACGACCAGGGCAATCGCACTACCCCTTCATATGTCGCGTTCAC 5332 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCT-AATCCTGTTA 474506 || || || | ||||| || ||||| || || | || | ||| ||| |||||| | Sbjct 5331 GGACACAGAGCGGCTTATCGGCGATGCAGCCAAGAACCAGGTTGC-TCTCAATCCTACCA 5273 Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566 | || | |||||||| || ||||||| || || || ||||| || ||| | ||| Sbjct 5272 ACACGGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTTTGACGACTCCAAGATTCAAC 5213 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 || |||| || ||||| || || || || |||| || ||||| | || ||| Sbjct 5212 AGGACATGCAACACTGGCCCTTCAAAGTTATCAATGAATACGGAAAACCTAAGATCCAAG 5153 Query 474627 C--AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCA--ATGGTT 474682 | | | ||| || | ||| |||| | || ||| |||| | || |||||| Sbjct 5152 TTGATTTTAA--AGGAGAGGCGAAAAAATTCGCCCCCGAAGAAAT--CAGCAGTATGGTT 5097 Query 474683 TTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742 | | || ||||| ||| ||| | ||||| ||| | || ||||||||| Sbjct 5096 CTTACAAAGATGAAGGAAATAGCGGAGGCTTATCTGGGAACGCAGGTGCGTGATGCAGTC 5037 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || ||||| || || || || || || |||||||| || || ||||||||||||||| Sbjct 5036 ATCACTGTACCCGCTTACTTCAACGACTCTCAACGCCAGGCTACTAAAGATGCGGGAGCT 4977 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 || ||||| || || || || || ||||| || ||||| ||||| |||||||| || || Sbjct 4976 ATCGCAGGCCTCAACGTCTTGCGAATTATCAACGAACCCACAGCTGCCGCACTGGCCTAC 4917 Query 474863 GGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGAT 474910 ||||||||||| || | | |||| ||| || ||||| |||||| Sbjct 4916 GGTCTTGATAAAAACCTTAAAGGAGAACGAAACGTGTTAATATTTGAT 4869 >seq25548 Length=6481 Score = 105 bits (116), Expect = 4e-17 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 356436 TCTTACATTTAGTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAAC 356495 |||||| |||| ||||| || ||||| ||||| | ||||| | ||||||||| || || Sbjct 5651 TCTTACGTTTAACGGTTTACCCTTTAAAGGGAATACGCCATAGTGATCTCTTCCCACCAC 5592 Query 356496 ATTTAATCCAGACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACA 356555 | | || |||| ||| |||| ||||||||| ||||| |||||||||||||| ||||| Sbjct 5591 ACCGAGACCCGACACAGCCAATGTTTTAGCTGAGTCTCCCTCAGTAAGAATTAACGTACA 5532 Query 356556 T 356556 | Sbjct 5531 T 5531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266775551758004