Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_020199.1 Length=47252 Score E Sequences producing significant alignments: (Bits) Value seq18169 531 2e-146 >seq18169 Length=2751 Score = 531 bits (588), Expect = 2e-146 Identities = 1165/1714 (68%), Gaps = 81/1714 (5%) Strand=Plus/Plus Query 36079 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTCGGAATTGATACA 36138 || || || ||| |||| | |||| ||| | || ||| | ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 36139 AATAGGGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 36198 || || || |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 36199 AGTGATATTAAAACAACATTT----AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAAT 36253 | | | | || || || ||||| ||||||||||||||||||| |||| || Sbjct 138 ACT----TCACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACAT 193 Query 36254 GGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACT 36313 | || | ||||| || ||| | || ||| ||||| | || || || ||||||||| Sbjct 194 GAATGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAG 253 Query 36314 AGACGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTATATCAC 36373 | || ||||| || ||| ||||| | ||| | |||||||| | | | || Sbjct 254 TGGTGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAAC 313 Query 36374 CTTTACAGTGTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAA 36433 || ||||| | |||| | | ||||| |||||| | ||| | || |||||||| || Sbjct 314 ATTCACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAA 373 Query 36434 CTTCATAATTTATCATGGTGAAAAATACACAATTAAGCAGACAGCGCCAAAGGTTGAAGG 36493 ||| || |||| ||| || |||| |||| ||||| || ||| | || |||| ||||| Sbjct 374 CTTTATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGG 433 Query 36494 TGATAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTC 36553 | ||| |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | Sbjct 434 TAATATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTA 493 Query 36554 AGTGGAATCAAA---TAAGCTTGATGACGACACTAGCGAAACTGGTAAAATACCA--GAA 36608 || |||||||| ||| |||||| | | | ||| | || | |||| || Sbjct 494 TGTTGAATCAAACCGTAAAGATGATGAGG------GTGCAACAG--AAGAAACCACTCAA 545 Query 36609 ---TATTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACGTCAGTCAAG 36665 || | ||||| || || || | ||||| ||||| |||||||| || | ||| Sbjct 546 TCGTACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAA 605 Query 36666 ATGACCTATAAAATAATTGGAGATTTTAAAAGAAAAATACCAATTGATGAATTAGGTAAC 36725 | | ||||||||| |||| |||| | ||| || |||||||||| | ||| | Sbjct 606 TTCAAATATAAAATATATGGATCGTTTACAGAGAAAGTAGAAATTGATGAACTTGGTGGC 665 Query 36726 AAAAATGGCTTAGAATATTGTAAAGAAGCAGTAGATTTGTTTGGTTGTATTATTTATCCA 36785 |||||||| | || || || | | || || |||| || |||||||| || Sbjct 666 AAAAATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCT 725 Query 36786 AATGATACGGAGATATGTTTTTATTCTCCTGAAACATTCTATCAAAGAAGTGAAAAAGTA 36845 |||||| || ||| | ||||| || |||||| ||| || || || || Sbjct 726 AATGATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTT 785 Query 36846 ATAAGGTATCAATATAATACTGATACTGTGTCTGCTACTGTCAGTACGTTGGAATTAAGA 36905 || | ||| || ||||||| |||| ||| || || | ||| || ||||| ||| ||||| Sbjct 786 ATCCGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGA 845 Query 36906 ACAGCTATAAAAGTTTTTGGGAAAAAGTACACAGCCGAG-GAAAAGAAAAATTATAATCC 36964 ||||||||||||| | ||| |||||||| || |||| |||| |||||| |||| ||| Sbjct 846 ACAGCTATAAAAGCATATGGCAAAAAGTATTCA-TCGAGTGAAACGAAAAACTATAGTCC 904 Query 36965 TATTAAA-----ACAACTGACATTAATTACTCAAATGATTTCATAAAAGAAGGCACTTAT 37019 ||||||| |||||||||| || |||| | ||| | ||| ||| | | ||| Sbjct 905 TATTAAAACGCCACAACTGACA-----TATTCAAGTAGTTTTAAAAAGGAAAGTAGTTAC 959 Query 37020 CGCACAGAAACAATTGGTTCTAAAGCAACTATTAACTTTGAT----TGCAAGTATGGTAA 37075 | |||||| | ||||| ||| | || | |||| || || | ||| | Sbjct 960 TATAGTGAAACACCAAATGCTAAA-CAA-TCGTA--TGTGATTACGTGTAAATTTGGCGA 1015 Query 37076 TGAAACAGTTAGATTTACAATCAAAAAAGGTTCCCAAGGTGGAATATATAAGTTGATTTT 37135 ||||||| || || ||| || ||||||||| | ||||||| | | | || | Sbjct 1016 TGAAACACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGT 1075 Query 37136 AGACGGCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TGAAA 37191 || ||||| || ||| | | | ||||||| ||||| || ||| || ||||| Sbjct 1076 TGATGGCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAA 1131 Query 37192 CAATAGATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAG 37251 |||| ||||||| ||| | | |||||| ||| | | ||| | ||||| || Sbjct 1132 CAATTGATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAG 1191 Query 37252 GAGAAGACCCCAAAAATAGAATTGATATCTCTTCAAATAAAAAAGCTAAGCCTTGTATGT 37311 | || || || | | || | || | || |||| || ||| | || |||| Sbjct 1192 GTGATGATCC-----AGCGCATAAACCTC-CAACAGATAAGAAGTCTAGG--TTTTATGC 1243 Query 37312 ACGTTGGAACTAAAAAATCAACAGTCTTAAATTTAATTGCTGACAATTCAGGTCGCAATC 37371 | || ||| |||||||||| || ||||||||||||||||| | | |||| || Sbjct 1244 A----GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAG 1299 Query 37372 AATACAAAGCAATTGTTGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATA 37429 ||| ||||| || ||| || | |||| | | || ||| ||| ||| | || || Sbjct 1300 CATATAAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTA 1357 Query 37430 TGCTAATACGCAAACAAATGAAGATATC-GAAACACAGGATAAGTTGCTAGA-ATTTGCA 37487 ||| ||||| |||||||| | ||| | || | || |||| ||| || || Sbjct 1358 TGCAAATACCGTCACAAATGACCAAATCAGTAATGTA-AATCAGTT-AAAGAGATGGGCG 1415 Query 37488 AAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATGGGTTATGAA 37547 | | ||| || | || || ||||| || |||||| || |||||||| ||||||| Sbjct 1416 ATGAGTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGAC 1475 Query 37548 AAAATAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAA 37607 | || | |||||||||| || | ||||| || ||||||||||| | |||||||||| Sbjct 1476 AGTATCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAA 1535 Query 37608 TTAAAGGTTGTTA----AACTTGATAGGTCACACCCATTTGTAAACGCAATAGATGAAGT 37663 ||||| ||||| | ||| || ||| |||||| || ||| | || | |||||| Sbjct 1536 TTAAAAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGT 1591 Query 37664 GTCTTTCAGCAATGAAATAAAAGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGT 37723 ||| ||||| |||||||||||||| ||||| |||||||||||||| | || | |||| | Sbjct 1592 GTCGTTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATT 1651 Query 37724 TATTGCACAAGATAATAGATATAACTATCAAGCA 37757 ||| |||||||| | || ||| ||||||||| Sbjct 1652 ACGTGCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 291 bits (322), Expect = 2e-74 Identities = 368/506 (73%), Gaps = 0/506 (0%) Strand=Plus/Plus Query 38348 TTACAAAGTCAAATTAACGCACTTGTTTTGGCACCGCGTAATAATAGCGCTAATGAGATT 38407 |||||||| ||||| | | || || || || ||||| ||||| |||||||||||| Sbjct 2237 TTACAAAGCCAAATAGGTAGATTGGTGTTAGCGCCACGTAACAATAGTGCTAATGAGATT 2296 Query 38408 GTTCAAGCTCGAGTTAATGTAAATGGCGAAACCTTTGATACATTAAAAGAACATTTAGAC 38467 || |||||| |||| ||| | ||||||| ||||| ||||| ||||| || | | Sbjct 2297 GTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAGATAATATCAAT 2356 Query 38468 GATTGGGAAACCAAAACTCAAAATAATAAAGAAGAAACTATAAGAGAACTAAATAAGGCT 38527 ||||| || || || | | ||||||||||| | || || | | || Sbjct 2357 TATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTGTACAACAAGCA 2416 Query 38528 AAACAACAAATTCTTGATATCGAGTACCGTTTTGAACCTGATAAGCAAGAATTTTTATTT 38587 | || || | | ||| | || || || |||||||| ||||| ||||| || ||||| Sbjct 2417 ACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTC 2476 Query 38588 GTAACAGAACTTGCACCACTTACAAATGCAGTGATGCAATCCTTCTGGTTTGATAATAGA 38647 ||||||||| | || || | ||||| ||||| ||||| || || |||||||||||| || Sbjct 2477 GTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGGTTTGATAATCGA 2536 Query 38648 ACAGGCATAGTATACATGACACAAGCTAGAAATAACGGCTATATGCTAAGTCGTTTAAGA 38707 | ||| || || || ||||||||||||||| |||||| |||||||| | | ||| || Sbjct 2537 AAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTCACAAGATTACGA 2596 Query 38708 CCTAATGGTCAATTTATAGATAGCTCATTAATTGTAGGCGGAGGTCATGGTACGCACAAC 38767 || || || |||| ||||||||| ||| | || | || || ||||| ||||| ||||| Sbjct 2597 CCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAAT 2656 Query 38768 GGCTATAGATATATTGATGATGAGTTATGGATATATAGTTTTATTTTAAATGGTAATAAT 38827 || || | ||||| |||||||| | ||||||||| |||||| |||||| ||||| Sbjct 2657 GGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAAAATGGCAATAAC 2716 Query 38828 GAAAACACATTAGTTCGCTTTAAGTA 38853 |||||||||||||||| || || || Sbjct 2717 CAAAACACATTAGTTCGGTTCAAATA 2742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151026090618564