Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq18205 372 4e-98 seq10663 311 1e-79 seq14033 104 3e-17 >seq18205 Length=6455 Score = 372 bits (412), Expect = 4e-98 Identities = 839/1249 (67%), Gaps = 20/1249 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATG--ATC 195356 || ||||| || ||||| || || || ||||| |||||||| ||||||||| ||| | | Sbjct 5450 GCGATTGGAATTGATTTGGGCACCACATACTCGTGTGTTGGGGTATGGCAACATGGAAAC 5391 Query 195357 GTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTA 195416 ||| ||||| || | || ||||| || || || || || || || || || || || | Sbjct 5390 GTG--GAGATCATTGCTAACGACCAGGGCAATCGCACTACCCCTTCATATGTCGCGTTCA 5333 Query 195417 CAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCA 195476 | || | || || || | || ||||| || || || ||| ||| | || |||| || Sbjct 5332 CGGACACAGAGCGGCTTATCGGCGATGCAGCCAAGAACCAGGTTGCTCTCAATCCTACCA 5273 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | || || ||||| || ||||| | || || ||||||||| || || | ||| Sbjct 5272 ACACGGTGTTTGATGCAAAGCGATTGATCGGCCGCAAGTTTGACGACTCCAAGATTCAAC 5213 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | || || | ||||| | | ||||| | | || | || |||| ||| Sbjct 5212 AGGACATGCAACACTGGCCCTTCAAAGTTAT---CAATGAATACGGAAAACCTAAGATCC 5156 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 | ||||| ||| | || ||| |||| |||| || ||||||||||| |||||| Sbjct 5155 AAGTTGATTTTAAAGGAGAGGCGAAAAAATTCGCCCCCGAAGAAATCAGCAGTATGGTTC 5096 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 | | ||||||||||| | ||||| ||| |||| | ||| |||||||| Sbjct 5095 TTACAAAGATGAAGGAAATAGCGGAGGCTTATCTGGGAACGCAGGTGCGTGATGCAGTCA 5036 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | |||||||| |||||||||| || || ||||| ||||| || || || || | |||| Sbjct 5035 TCACTGTACCCGCTTACTTCAACGACTCTCAACGCCAGGCTACTAAAGATGCGGGAGCTA 4976 Query 195777 TTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTAT 195835 | || || || ||| ||||| |||||||||| ||||| ||||| || ||| | || || Sbjct 4975 TCGCAGGCCTCAAC-GTCTTGCGAATTATCAACGAACCCACAGCTGCCGCACTGGCCTAC 4917 Query 195836 GGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 ||||| || || ||| | | ||| ||| || || || ||||||||||| || || Sbjct 4916 GGTCTTGATAAAAACCTTAAAGGAGAACGAAACGTGTTAATATTTGATCTCGGCGGGGGC 4857 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGA--AGG--TGGTATATTCGAAGTAAAGGCTAC 195951 || ||||| ||||| |||| | || || ||| | || |||| ||||| || || || Sbjct 4856 ACATTTGACGTCTCTATTCTTACCATCGATGAGGGATCGT-TATTTGAAGTGAAAGCGAC 4798 Query 195952 TGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTC 196011 ||| || || || ||||| || || ||||| |||||| | ||| || | | ||| | Sbjct 4797 TGCCGGCGACACGCATCTCGGAGGCGAAGACTTCGATAACAGACTTGTCAATTACTTGGC 4738 Query 196012 TGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 |||||| || || || |||||||||| || ||| || | || ||||| ||||| Sbjct 4737 TGATGAATTTAAGCGCAAATATAAGAAAGACATACGTGGTAACTCCAGAGCTCTACGTCG 4678 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 ||| | ||||| ||||| || ||||| || | || || | | || ||| | | Sbjct 4677 GCTACGTACTGCTGCCGAACGAGCAAAACGCACATTGTCATCGAGCACGGAAGCAACGAT 4618 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTT 196191 ||||| || || ||| || |||||||||||||| || | || | | || || || Sbjct 4617 AGAGATAGACGCGCTGTACGAAGGAATTGACTTCTACACGAAAGTTTCGAGAGCTCGGTT 4558 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 |||||| ||||| || ||| |||| | | | || || || || ||| | Sbjct 4557 TGAAGAATTAAATTCCGATCTGTTCCGTGGTACTCTTGAGCCAGTGGAGAAAGCTTTAAA 4498 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 || ||||||||||| ||| | | || |||| || || ||||| || || || Sbjct 4497 GGATGCAAAGATGGACAAGAGCGCCATCCACGATGTTGTACTCGTCGGAGGTTCTACTCG 4438 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371 ||||| ||||| ||| | ||||| | |||||| | ||| | | ||| | Sbjct 4437 AATTCCCAAGATACAAAACATGCTACAAAACTTCTTTTGTGGTAAGAAACTGAACCTCTC 4378 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 ||||| || || || || || ||||| || || || || |||||||||| | | | | Sbjct 4377 CATCAATCCAGACGAGGCGGTGGCTTACGGGGCTGCGGTACAGGCTGCTA---TATTAAG 4321 Query 196432 TGTTG-ACA--ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCT 196488 || | ||| ||| || | |||||| | | ||| | ||||| || || | || || Sbjct 4320 TGGCGAACAACATAGCAAAATTCAAGATGTATTACTAGTGGATGTCGCGCCGTTGTCTCT 4261 Query 196489 GGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || || || ||||| ||||| || || ||||| |||||| Sbjct 4260 CGGCATCGAGACGGCTGGAGGTGTCATGACGAAGATCATTGAAAGGAAC 4212 >seq10663 Length=11193 Score = 311 bits (344), Expect = 1e-79 Identities = 1041/1612 (65%), Gaps = 31/1612 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || || |||||||| || || || || ||||| ||||| ||||| | | | | Sbjct 2822 GCAATCGGCATTGATTTAGGTACAACATATTCTTGTGTCGGTGTGTGGCAGCACGGTAAT 2763 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || ||||||| ||||| || | || || || || ||||||||||| || Sbjct 2762 GTGGACATCATAGCGAATGATCAAGGGAATAGAACCACACCGTCATACGTTGCCTTCACC 2703 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| |||||| || ||||||| || || ||||| ||| || | ||||| || || Sbjct 2702 GATACTGAACGCCTAATTGGAGACGCGGCGAAAAACCAGGTTGCCTTAAACCCAATTAAC 2643 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||| ||||| || || ||| | || | ||| ||| | || | Sbjct 2642 ACAGTATTTGACGCAAAGCGGCTAATAGGTAGGAAATACGATGATCCTAAAATACAGCAA 2583 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || |||| | ||| ||| | |||| || || || || || | || | Sbjct 2582 GACCTAAAACATTGGCCTTTTAAAGTAGTAAA---TGAAAGTGGGAAACCAAAAATACAA 2526 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 ||| | | || ||| |||| ||||| || |||||||| ||||| | Sbjct 2525 GTTACTCATAAAGGAAAGACTAAACGTTTTGCACCTGAAGAAATAAGCAGCATGGTTCTA 2466 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || || ||||| ||||| || ||||| | |||| | | || | | || ||| | Sbjct 2465 ATAAAAATGAAAGAGACGGCAGAATCGTATTTGGGGTCATCCGTAAGTAAGGCGGTTATC 2406 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || ||||| ||||| | || || |||||||| || ||||| || |||| ||||| Sbjct 2405 ACAGTTCCTGCCTACTTTAACGACTCTCAACGACAAGCAACAAAAGATGCTGGGACTATT 2346 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || ||||| |||| |||| || || ||||| || || || ||| | ||||| || Sbjct 2345 GCCGGACTAAATGTTCTTCGAATCATAAACGAACCTACTGCAGCAGCATTGGCTTACGGC 2286 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 | || || || | | || | || || |||| |||||| | || || ||||| Sbjct 2285 TTAGATAAAAATTTAAAAGGTGAGAGGAACGTTCTGATTTTTGATTTAGGCGGCGGTACC 2226 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGG---TATATTCGAAGTAAAGGCTACTGCT 195955 |||||||| || | | || || || | || | | || || || || | |||||| Sbjct 2225 TTTGATGTTTCCATATTGAACATCGACGAAGGATCTCTTTTTGAGGTCAAATCAACTGCT 2166 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCT--TCTCCGTCATTTGTCTG 196013 || ||||||||||| || || ||||| || || || || || | || || ||| Sbjct 2165 GGAGATACTCATCTCGGCGGAGAAGACTTTGACAGCCGCCTAGTCAACTTC--TTAGCTG 2108 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATAT---TTCTGGAAATCCTAGGGCTCTTCGTC 196070 ||||||| |||| |||||||||| | |||| || | | || || || | Sbjct 2107 ATGAGTTTAAAAGAAAACATAAGAAAGACCTCCATTCT---AACTCAAAAGCGCTACGCC 2051 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGG 196130 | || || || ||| || | || || || || || ||||||| | || | | Sbjct 2050 GCCTCAGAACAGCAGCAGAGAGGGCTAAGCGCACACTTTCTTCTAGTACGGAAGCTAACA 1991 Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190 | || ||||| | || | || || || || |||||| ||| || | | ||| | | Sbjct 1990 TCGAAATTGACGCTTTATACGAAGGCATAGATTTCTATTCAAGAGTTTCTAGAGCAAGAT 1931 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 |||| ||| | || ||||||| ||| | | | | || || || ||| | | ||| Sbjct 1930 TTGAGGAGCTGAATGCTGATTTATTTCGAACAACTTTAGATCCAGTAGAAAAGGCTCTTA 1871 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 ||||| || | |||||| | || |||| || || | || || || || || | Sbjct 1870 AAGACGCTAAATTAGATAAGAATTCAATTAATGACATCGTGTTAGTTGGGGGCTCGACAC 1811 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCT----AGCTTCTTCAATAATAAAGATTTAAAC 196366 | ||||| || || || | | |||| | ||||||||| ||| | | || Sbjct 1810 GGATTCCAAAAATCCA----GTCCCTTCTGCAAACTTTCTTCAATGGAAAAAAGCTCAAT 1755 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | || || || || ||||| ||||| || || || || |||||||| ||||| || Sbjct 1754 TTATCTATAAATCCAGACGAAGCCGTTGCATACGGAGCTGCAGTTCAGGCAGCTATACT- 1696 Query 196427 TCAGGTGTTGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTA 196483 | ||| |||| || ||| ||||||| || |||| | ||||| | || | Sbjct 1695 --AAGTGGCGACAAACATTCTAAGATCCAAGACGTTTTGCTGGTGGATGTGACTCCTTTG 1638 Query 196484 TCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACT 196543 || || ||| | || || || || || |||||||| || || | ||| | || | | Sbjct 1637 TCACTAGGTATAGAGACGGCTGGAGGAGTTATGACAAATATAGTAGATCGAAATGCTAAA 1578 Query 196544 ATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCAT 196603 || || || | ||| || ||||||| | || ||||| || | || | Sbjct 1577 ATACCCTGCAAACATTCCCAAACATTCACAACGTACGCTGACAATCAGCCTGCAGTCACT 1518 Query 196604 ATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTC 196663 || ||||| |||||||||||| | | | || || ||| || || | || || ||| Sbjct 1517 ATACAAGTGTATGAAGGAGAAAGAGCAATGACTAAAGACAACAATTTATTGGGGACATTC 1458 Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723 ||||||||||| || || | || || | |||||||| || || | ||| ||| ||| Sbjct 1457 GATTTGACGGGTATACCGCCAGCTCCACGTGGTGTTCCTCAAATAGACGTTACCTTTGAT 1398 Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783 |||| || |||||||| |||| || | ||| | || || | || || || | Sbjct 1397 TTAGATGCGAATGGAATATTAAATGTTTCCGCTAAAGAGAACAATAGCGGAAAGTCGAAG 1338 Query 196784 AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTT 196843 || || || |||| ||||| || || || | ||| | | || || || || ||||| Sbjct 1337 AACATAGTAATTAAAAATGATAAAGGTCGTTTATCTCAAGCCGATATAGAGCGAATGGTG 1278 Query 196844 CAAGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATA-TGAGAAACAGATG 196894 ||| || || |||| ||| ||||| || || | |||||| || || Sbjct 1277 GCAGACGCAGAGAAGTTTAGGAGCGAAGATGATCTACAGAGAGAAAGAGTTG 1226 >seq14033 Length=9243 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||||| || || || || |||||||| ||||| ||| | || Sbjct 4597 ATGCAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCG 4538 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||| ||||| || || || ||||| || || ||| Sbjct 4537 GACACTATCGAGAATGTCAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 4478 Query 171982 CA 171983 || Sbjct 4477 CA 4476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657593309608560