Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_021323.1 Length=45572 Score E Sequences producing significant alignments: (Bits) Value seq18169 536 4e-148 >seq18169 Length=2751 Score = 536 bits (594), Expect = 4e-148 Identities = 1162/1713 (68%), Gaps = 79/1713 (5%) Strand=Plus/Plus Query 34981 GATTTTGTTTTAGATGGTGTGTATGCATATCGAGATATAAATAGAGTGGGAATTGATACA 35040 || || || ||| |||| | |||| ||| | || ||| | ||| || || ||||| Sbjct 18 GACTTCGTATTAAGTGGTATACATGCTTATAGGGACCAAAACAAAGTTGGTATAGATACC 77 Query 35041 AATAGGGGCATTATAACATTAGCGCCAGGTAAAAATGAATTTAAGATTAAAGGAGACGTC 35100 || || || |||| ||||||||||| |||||||||||||||||||| || ||||| || Sbjct 78 AACAGAGGTGTTATTACATTAGCGCCTGGTAAAAATGAATTTAAGATAAAGGGAGATGTG 137 Query 35101 AGTGATATTAAAACTACATTT-AAGTTTCCTTTTATTTATAGGTAGG-TGATTTAATGGA 35158 | | | |||| | || ||||| ||||||||||||||||||| |||| ||| | Sbjct 138 ACTTC-ACAAAAAGTGTTGTTCAAGTTCCCTTTTATTTATAGGTAGGGTGATAACATGAA 196 Query 35159 TTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGA 35218 | | ||||| || ||| | || ||| ||||| | || || || ||||||||| | Sbjct 197 TGAACATGACCACTTAGCCGTGATGAATTTTGAGAAAACAATATGCGAAAATTTAAGTGG 256 Query 35219 TGTAGATTATGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACCTT 35278 ||| |||||||| ||| ||||| | ||| | |||||||| | | || || Sbjct 257 TGTTGATTATGGAGGTTTCAAAGACGACAATGTGTTAAATGAAGCCTCTTCTTTAACATT 316 Query 35279 TACAGTTTATAGAACTACTCATAATAGTTTTGTTTTTGATTTATTGATTTGTGAAAACTT 35338 |||||| | |||| | | ||||| |||||| | ||| | || |||||||| ||||| Sbjct 317 CACAGTTAACCGAACAAGTGATAATCGTTTTGAGTATGACATGTTAATTTGTGAGAACTT 376 Query 35339 CATAATTTATCATGGTGAAAAATATACAATTAAGCAGACAGCGCCAAAGGTTGAAGGTGA 35398 || |||| ||| || |||| ||| ||||| || ||| | || |||| |||||| | Sbjct 377 TATCATTTTTCAAGGAGAAACATACGTGATTAAACAAACAACCCCGAAGGCAGAAGGTAA 436 Query 35399 TAAAGTTTTTATTGAAGTTACGGCATATCACATAATGTATGAATTTCAAAATCACTCAGT 35458 || |||| ||||||||||| ||| |||||| |||||||||||| |||||||| | || Sbjct 437 TATCGTTTCTATTGAAGTTATCGCACATCACACAATGTATGAATTCCAAAATCATTATGT 496 Query 35459 GGAATCAAA---TAAGCTTGATGA-----CGACAGTAGCGAAACTGGTAAAATGCCAGAA 35510 |||||||| ||| |||||| | |||| | ||||| | || | Sbjct 497 TGAATCAAACCGTAAAGATGATGAGGGTGCAACAGAA--GAAACCACTCAATCG------ 548 Query 35511 TACTCTTTAGATGAGTACTTAAGATATGGATTTGCAAATCAAAAAACTTCGGTCAAAATG 35570 ||| | ||||| || || || | ||||| ||||| |||||||| || | | |||| | Sbjct 549 TACACGTTAGAAGAATATTTGAAATATGTGTTTGCTAATCAAAAGACATTGCACAAATTC 608 Query 35571 ACCTATAAAATAATTGGAGATTTTA-AGCGAAAAGTACCGATTGACGAATTAGGTAACAA 35629 | ||||||||| |||| |||| || | |||||| ||||| ||| | ||| ||| Sbjct 609 AAATATAAAATATATGGATCGTTTACAGAG-AAAGTAGAAATTGATGAACTTGGTGGCAA 667 Query 35630 AAACGGCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAA 35689 ||| || | || || || | | || | |||| | ||| |||| ||| || Sbjct 668 AAATGGTATTGAGGCAATCAATGATGGTATCGAATTATTTGATTATATTATTTTCCCTAA 727 Query 35690 TGATACAGAGATTGGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGAT 35749 |||| || || || ||||| || ||| || ||| || ||||| || || Sbjct 728 TGATGATGAAATAGGCTTTTACAAAAGAGATGTATTCTACCAACCAACAGAGAATGTTAT 787 Query 35750 TCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAAC 35809 || ||| || ||||||| |||| ||| || |||| ||| || || || ||| ||||||| Sbjct 788 CCGTTATAAACATAATACGGATAATGTTTCAGCAAGTGTTAGCACGTTAGAACTAAGAAC 847 Query 35810 AGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAG-GAAAAGAAAAATTATAATCCTA 35868 ||||||||||| | ||| ||||||||| || | ||| |||| |||||| |||| ||||| Sbjct 848 AGCTATAAAAGCATATGGCAAAAAGTATTCATC-GAGTGAAACGAAAAACTATAGTCCTA 906 Query 35869 TTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCG 35928 ||| ||| | | | | |||||||| | |||||| ||| ||| ||| ||| || | Sbjct 907 TTAAAACGCCACAACTGACATATTCAAGTAGTTTTAAAAAGGAAAGTAGTTACTATAGTG 966 Query 35929 AAACAATTGGGTCTAAAGCT--ACTATTAACTTTGAT----TGCAAGTATGGTAATGAAA 35982 ||||| | || ||| || || | |||| || || | ||| |||||| Sbjct 967 AAACA------CCAAATGCTAAACAATCGTATGTGATTACGTGTAAATTTGGCGATGAAA 1020 Query 35983 CAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACG 36042 || || || ||| || ||||| || | ||||||| | | | || | || | Sbjct 1021 CACTTCGACATACGATTAAAAAAGGTCCATTAGGTGGACTGTTCGAAACATTTGTTGATG 1080 Query 36043 GCAAGCAAATTAAGCA-AATTTCTTGTTTTGCTAAGTCGGTTCAGTC---TCAAACAATA 36098 |||| || ||| | | | ||||||| ||||| || ||| || | ||||||| Sbjct 1081 GCAA-CAGTTTAGGGACTAAATCTTGTTGGGCTAAATC--ATCA-TCAAGTGAAACAATT 1136 Query 36099 GATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAA 36158 ||||||| ||| | | |||||| ||| | | ||| | ||||| ||| || Sbjct 1137 GATTTAAAGAAAGGTTTGTCTAAAGGACGACACACTGTTGAATTTGTATTTAAAGGTGAT 1196 Query 36159 GACCCCAAAAACAGAATTGATATATCTTCAA---ATAAAAAAGCTAAGCCTTGTATGTAC 36215 || || | ||| | || ||| |||| || ||| | || |||| | Sbjct 1197 GATCC---------AGCGCATAAACCTCCAACAGATAAGAAGTCTAGG--TTTTATGCA- 1244 Query 36216 GTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATCAA 36275 || |||||||||||||| || ||||||||||||||||||| | |||| || | Sbjct 1245 ---GGTACTGAAAAATCAACTGTATTAAATTTAATTGCTGATACTACAGGCGATAAAGCA 1301 Query 36276 TACAAAGCAATTGTTGACTACG--TCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATG 36333 || ||||| || ||| || | |||| | | || ||| ||| ||| | || |||| Sbjct 1302 TATAAAGCTGTTTATGAATATGTATCGC-CACA-AGCTAAGAAGTATGGTTTACGTTATG 1359 Query 36334 CTAATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGA---ATTTGCAA 36390 | ||||| |||||||| | ||| | | | || | |||| | || || | Sbjct 1360 CAAATACCGTCACAAATGACCAAATC---AGTAATGTAAATCAGTTAAAGAGATGGGCGA 1416 Query 36391 AAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAA 36450 | ||| || | || || ||||| || |||||| || |||||||| ||||||| | Sbjct 1417 TGAGTCAATTACAAGACACGCCTAAAACAGAATTAACCGTGAATTATATCAGTTATGACA 1476 Query 36451 AAATAGAGCCAAGAGATAGCGTATTCTTTGTTCATGAATTAATGGGATATAACACTGAAT 36510 || | |||||||||| || | ||||| || ||||||||||| | ||||||||||| Sbjct 1477 GTATCGGACCAAGAGATACTGTTATTTTTGTGCACGAATTAATGGGCTTTAACACTGAAT 1536 Query 36511 TAAAGGTTGTTA----AACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTG 36566 |||| ||||| | ||| || ||| ||| || || ||| | || | ||||||| Sbjct 1537 TAAAAGTTGTAAGTATAAC--GAAAGG--ACACCCTTTCACAAATACGATTGCTGAAGTG 1592 Query 36567 TCTTTCAGCAATGAAATAAAGGATATGGTACAAATTCAACAAGCGCTTAACAGACGAGTT 36626 || ||||| ||||||||||| || ||||| |||||||||||||| | || | |||| | Sbjct 1593 TCGTTCAGTAATGAAATAAAAGACATGGTTCAAATTCAACAAGCATTGAATAAACGATTA 1652 Query 36627 ATTGCACAAGATAATAGATATAACTATCAAGCA 36659 ||| |||||||| | || ||| ||||||||| Sbjct 1653 CGTGCGCAAGATAACAAATTTAATTATCAAGCA 1685 Score = 286 bits (316), Expect = 1e-72 Identities = 379/520 (73%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 37241 AACAAATCTTTACAAAGTCAAATTAACGCAC-TTGTTGTG-GCACCACGTAATAACAGTG 37298 |||||| |||||||| ||||| | | | ||| ||| || |||||||| || |||| Sbjct 2228 AACAAAGACTTACAAAGCCAAAT--AGGTAGATTGGTGTTAGCGCCACGTAACAATAGTG 2285 Query 37299 CTAATGAGATTGTTCAAGCTCGAGTTAATGTAAACGGCGAAACCTTTGACACATTAAAAG 37358 ||||||||||||| |||||| |||| ||| | |||||| ||||| ||||| |||| Sbjct 2286 CTAATGAGATTGTACAAGCTAGAGTGAATATGTTTGGCGAAGAATTTGAAACATTGAAAG 2345 Query 37359 AACATTTAGACGATTGGGAAACCAAAACTCAAATTAATAAAGAGGAAACTATAAGAGAAT 37418 | || | | ||||| || || || ||| ||||||| ||| | || Sbjct 2346 ATAATATCAATTATTGGCAAGAACGTACGCATATTGATAAAGAAGAAGTTTTATCGTCTG 2405 Query 37419 TA-AATAAGACCAAACAAGAAATTCTTGATATCGAGTATCGTTTTGAACCTGATAAGCAA 37477 || || ||| | | ||||| | | ||| | || ||||| |||||||| ||||| ||| Sbjct 2406 TACAACAAG-CAACTAAAGAAGTATTAGATTTAGAATATCGCTTTGAACCAGATAAACAA 2464 Query 37478 GAATTTTTATTTGTGACAGAACTTGCACCTCTTACAAATGCAGTAATGCAATCCTTCTGG 37537 || || ||||| || |||||| | || ||| | ||||| ||||| ||||| || || ||| Sbjct 2465 GAGTTCTTATTCGTAACAGAATTAGCGCCTTTAACAAACGCAGTTATGCAGTCATTTTGG 2524 Query 37538 TTTGATAATAGAACAGGCATAGTATACATGACACAAGCTAGAAATAATGGCTATATGCTA 37597 ||||||||| ||| ||| || || || ||||||||||||||| ||| || |||||||| Sbjct 2525 TTTGATAATCGAAAAGGTATTGTCTATATGACACAAGCTAGAGGTAACGGATATATGCTC 2584 Query 37598 AGTCGTCTAAGACCTAATGGTCAATTTATAGACAGCTCATTGATTGTAGGTGGGGGTCAT 37657 | | || |||| || || |||| |||||| || ||| | || | ||||| ||||| Sbjct 2585 ACAAGATTACGACCAAACGGGCAATATATAGATAGTTCACTTGTTATTGGTGGTGGTCAC 2644 Query 37658 GGTACACATAACGGTTATAGATATATTGATGATGAGTTATGGATTTATAGTTTTATCTTA 37717 |||||||| || ||||| | ||||| |||||||| | ||||| ||| ||||| | Sbjct 2645 GGTACACACAATGGTTACCGTTATATAGATGATGAACTTTGGATATATTCATTTATTAAA 2704 Query 37718 AATGGTAATAATGAGAATACATTAGTTCGTTTCAAGTATA 37757 ||||| ||||| | || ||||||||||| ||||| |||| Sbjct 2705 AATGGCAATAACCAAAACACATTAGTTCGGTTCAAATATA 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145652179654884