Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_021801.1 Length=42902 Score E Sequences producing significant alignments: (Bits) Value seq18169 109 2e-19 >seq18169 Length=2751 Score = 109 bits (120), Expect = 2e-19 Identities = 219/319 (69%), Gaps = 17/319 (5%) Strand=Plus/Plus Query 27083 GAATATCGATTCGAACCGAAAGAGCAAGAACCAGAATTTATCACTGACTTATCGCCATAC 27142 |||||||| || ||||| | | ||||| ||| | || || ||| |||| | Sbjct 2438 GAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTCGTAACAGAATTAGCGCCTTTA 2497 Query 27143 ACTAACGCAGTAATGCAATCATTTTGGGTAGACCCTAAAACAAAAATTATT---TATATG 27199 || |||||||| ||||| ||||||||| | || ||| |||| |||| |||||| Sbjct 2498 ACAAACGCAGTTATGCAGTCATTTTGGTTTGA---TAATCGAAAAGGTATTGTCTATATG 2554 Query 27200 ACACAAGCGCGTCCAGGCAATCATTACATGTTATCTAGATTGAAGCCCAACGGACAATTT 27259 |||||||| | ||| || || ||| | | ||||| || ||||| |||| | Sbjct 2555 ACACAAGCTAG---AGGTAACGGATATATGCTCACAAGATTACGACCAAACGGGCAATAT 2611 Query 27260 ATTGATAGATTGCTTGTTAAAAATGGCGGTCACGGTACACACAATGCGTATAGATACATT 27319 || ||||| | ||||||| ||| ||||||||||||||||||| || | || || Sbjct 2612 ATAGATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAATGGTTACCGTTATATA 2671 Query 27320 AATGGAGAATTATGGATTTATTCAGCTGT----ATTGGACAGTAACAAAAACAACAAGTT 27375 ||| ||| | ||||| |||||| | | | ||| || |||| ||||| ||| || Sbjct 2672 GATGATGAACTTTGGATATATTCATTTATTAAAAATGG-CAATAACCAAAAC-ACA--TT 2727 Query 27376 TGTACGTTTCCAATATAGA 27394 || || ||| |||||||| Sbjct 2728 AGTTCGGTTCAAATATAGA 2746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137111499730464