Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq24087 257 1e-63 >seq24087 Length=8432 Score = 257 bits (284), Expect = 1e-63 Identities = 370/518 (71%), Gaps = 18/518 (3%) Strand=Plus/Minus Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627 || || |||| || ||||||||||||| ||||| |||||||||||||| ||||| || Sbjct 2430 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 2371 Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687 |||||| |||| | ||||||||| || || || || ||| | |||||||| ||| Sbjct 2370 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCCCAG 2311 Query 103688 TGTCCGTTCCTGaaaaaaaCGGCTG---CTGGC--------GCGCT-GCCCGCCGGC--- 103732 || || |||||| ||| | ||||| |||| |||||| | Sbjct 2310 TGCCCCTTCCTGCGGCGGCAGGCGGAATCTGGCAACGTGCCGCGCGAGCCCGCGCCCTCG 2251 Query 103733 CTTGCGATGGACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAACGCCTGC 103792 || ||| | || || ||||||||||||||| |||||| ||| || | || || | Sbjct 2250 CTCGCGCCCGCTGGCCACGACGAGTGCGGCGTGCGCGCGCCCCCGCCCGCGC-CGGCTCC 2192 Query 103793 GTGCGCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAACT 103852 |||||||||||||||| |||| | || | |||||||||||| | | | | | Sbjct 2191 C--CGCATGCCCGGCCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCCTGCGCAGC 2134 Query 103853 TTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATTC 103912 || | || ||||| || ||| |||| ||||| || ||| | | |||||||| |||||| Sbjct 2133 TTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTC 2074 Query 103913 TACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGAT 103972 | |||||||||||| | ||||| || || ||||||||||| ||||| || || ||||| Sbjct 2073 TTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGAC 2014 Query 103973 TGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATAC 104032 |||||| |||| || | ||||||| | || ||||||| | || ||| ||||| ||| Sbjct 2013 TGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTAC 1954 Query 104033 GTGCTACTTGTCAAGGGCCACGATTATGTACAAAAGGT 104070 |||| || ||||| |||| || || || || ||||| Sbjct 1953 GTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGT 1916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398717723320147