Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq24087 111 1e-19 seq14033 82.4 6e-11 >seq24087 Length=8432 Score = 111 bits (122), Expect = 1e-19 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 89727 GCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGtttttttt 89786 || |||||||| || | |||| || || |||||| | | || || || || || || | Sbjct 2129 GCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCT 2070 Query 89787 ACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGG 89846 |||| ||||| || ||||| || | || |||| || |||| || || ||||| |||| Sbjct 2069 ACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGG 2010 Query 89847 AAGATGGCGATGAACCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTC 89906 | | | ||| | || ||||| || || ||||||||||| || ||| ||| || | Sbjct 2009 AGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGC 1950 Query 89907 AACTAGTAAAAGGACGCGATTACGTGCAAAATGTTATTTCGAACGCTTGCGTTATACCCG 89966 | || || ||||| || || ||||| || || || || || | || |||| | | |||| Sbjct 1949 AGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAGGCGTGCGCTCTCCCCG 1890 Query 89967 C 89967 | Sbjct 1889 C 1889 >seq14033 Length=9243 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 29662 CTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACA 29721 || ||||| || || ||||| |||||||||||||| | || |||||| | || | | Sbjct 4473 CTCTGCTGGTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATA 4532 Query 29722 GTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATC 29781 ||||| || | || || ||||| || || || || || |||| |||||| || || ||| Sbjct 4533 GTGTCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTTAGGGTTTTCACGAAAATC 4592 Query 29782 TGCAT 29786 ||||| Sbjct 4593 TGCAT 4597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385065570128943