Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq10663 426 1e-113 seq18205 325 3e-83 seq8267 87.8 1e-11 seq2102 87.8 1e-11 >seq10663 Length=11193 Score = 426 bits (472), Expect = 1e-113 Identities = 986/1470 (67%), Gaps = 22/1470 (1%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | || ||||| ||||| |||||||| || || || |||||||| || || | Sbjct 1372 ACATTTAATATTCCATTCGCATCTAAATCAAAGGTAACGTCTATTTGAGGAACACCACGT 1431 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 |||| || || || || ||||| ||||| |||| ||| || |||||||| | | Sbjct 1432 GGAGCTGGCGGTATACCCGTCAAATCGAATGTCCCCAATAAATTGTTGTCTTTAGTCATT 1491 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || ||| || || | | ||| ||||| ||| ||| ||||| || | || ||||| Sbjct 1492 GCTCTTTCTCCTTCATACACTTGTATAGTGACTGCAGGCTGATTGTCAGCGTACGTTGTG 1551 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATA 281671 ||| | ||| | ||| || || ||| | | |||| ||| | ||||| ||||||| Sbjct 1552 AATGTTTGGGAATGTTTGCAGGGTATTTTAGCATTTCGATCTACTATATTTGTCATAACT 1611 Query 281672 CCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGA 281731 || ||||| || |||| ||| || || | |||||| ||||| || || | || | ||| Sbjct 1612 CCTCCAGCCGTCTCTATACCTAGTGACAAAGGAGTCACATCCACCAGCAAAACGTCTTGG 1671 Query 281732 AGTTTTTCATCAGTTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAA 281789 | || || ||||| | || || |||||||| |||| ||||| || ||||||| Sbjct 1672 ATCTTAGAAT--GTTTGTCGCCACTTAGTATAGCTGCCTGAACTGCAGCTCCGTATGCAA 1729 Query 281790 CAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAA 281849 | ||||| || ||||| | || | ||| || ||||| |||||||| ||| || |||| Sbjct 1730 CGGCTTCGTCTGGATTTATAGATAAATTGAGCTTTTTTCCATTGAAGAAAGTTTGCAGAA 1789 Query 281850 GTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908 | | || | || ||||| || | || || |||||||| || || |||| | || Sbjct 1790 GG-GACTGGATTTTTGGAATCCGTGTCGAGCCCCCAACTAACACGATGTCATTAAT-TGA 1847 Query 281909 GAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAA 281967 | ||||| | ||| | || | | | ||||| || || || | | | || ||| Sbjct 1848 ATTCTTATCTAATTTAGCGTCTTTAAGAGCCTTTTCTACTGGATCTAAAGTTGTTCGAAA 1907 Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCC 282027 || || | | || || || ||| | ||||||| || | || |||| || || Sbjct 1908 TAAATCAGCATTCAGCTCCTCAAATCTTGCTCTAGAAACTCTTGAATAGAAATCTATGCC 1967 Query 282028 TTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGC 282087 |||| | |||| |||| ||| || ||| || || |||||| |||| || ||||| Sbjct 1968 TTCGTATAAAGCGTCAATTTCGATGTTAGCTTCCGTACTAGAAGAAAGTGTGCGCTTAGC 2027 Query 282088 ACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA-TCTGTTT 282146 | || |||||| || || | |||| ||||||| | | || | | ||| | | Sbjct 2028 CCTCTCTGCTGCTGTTCTGAGGCGGCGTAGCGCTTTTGA-GTTAGAATGGAGGTCTTTCT 2086 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 282206 ||| |||||| || || || ||| | | | | || || || | ||||| ||||| | Sbjct 2087 TATGTTTTCTTTTAAACTCATCAGCTAAGAAGTTGACTAGGCGGCTGTCAAAGTCTTCTC 2146 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTCAAGAG 282263 | || | | ||||| ||| | || | | | || | ||||| ||| || || | Sbjct 2147 CGCCGAGATGAGTATCTCCAGCAGTTGATTTGACCTCAAAAAGAGATCCTTCGTCGATGT 2206 Query 282264 ACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTT 282323 ||| | | ||||||| ||| || || || | ||||||||| || || ||| | || Sbjct 2207 TCAATATGGAAACATCAAAGGTACCGCCGCCTAAATCAAAAATCAGAACGTTCCTCTCAC 2266 Query 282324 TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTC 282383 | | |||||||| | || || || || || || ||||| ||||| || || |||| Sbjct 2267 CTTTTAAATTTTTATCTAAGCCGTAAGCCAATGCTGCTGCAGTAGGTTCGTTTATGATTC 2326 Query 282384 TCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGT 282443 | |||||| || || ||||| | || |||||||| || ||||||| ||| || |||| Sbjct 2327 GAAGAACATTTAGTCCGGCAATAGTCCCAGCATCTTTTGTTGCTTGTCGTTGAGAGTCGT 2386 Query 282444 TAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTG 282503 |||| || |||||||| || ||||| || | |||| | || | ||| | || Sbjct 2387 TAAAGTAGGCAGGAACTGTGATAACCGCCTTACTTACGGATGACCCCAAATACGATTCTG 2446 Query 282504 CTGTTTGTTTCATTTTACTTAAAATCATTGATGAA-ATTTGTTCTGGAGAATATTGCTTG 282562 | || | ||||||||| ||| || ||| | || |||| ||| || | | | | || Sbjct 2447 CCGTCTCTTTCATTTTTATTAGAACCAT-GCTGCTTATTTCTTCAGGTGCAAAACGTTTA 2505 Query 282563 GA--TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAA 282620 | ||| ||| || | |||| | | |||||| || |||| | ||||||| Sbjct 2506 GTCTTTCCTTT--ATGAGTAACTTGTATTTTTGGTTTCCCACTTTCATTTACTACTTTAA 2563 Query 282621 ATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATC 282680 | ||||||| ||| | ||| || | | | |||| | | ||||| |||| | Sbjct 2564 AAGGCCAATGTTTTAGGTCTTGCTGTATTTTAGGATCATCGTATTTCCTACCTATTAGCC 2623 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 | ||||| ||||| | || || |||| || | ||| | || | ||| || || |||| Sbjct 2624 GCTTTGCGTCAAATACTGTGTTAATTGGGTTTAAGGCAACCTGGTTTTTCGCCGCGTCTC 2683 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 |||| || |||| || || || || | ||| ||||| || || || | ||| ||||||| Sbjct 2684 CAATTAGGCGTTCAGTATCGGTGAAGGCAACGTATGACGGTGTGGTTCTATTCCCTTGAT 2743 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 ||||||| || || || || ||||| | ||||| ||||| |||||| | | ||||| | Sbjct 2744 CATTCGCTATGATGTCCACATTACCGTGCTGCCACACACCGACACAAGAATATGTTGTAC 2803 Query 282861 CTAAATCAATACCAATAGCA---ATTTTAT 282887 |||||||||| || || ||| ||||||| Sbjct 2804 CTAAATCAATGCCGATTGCAGGCATTTTAT 2833 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/226 (69%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 86025 GATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACGTTACC 86084 ||| |||| || |||||||| || || || | ||||| ||| ||| | ||||| | Sbjct 2202 GATGTTCAATATGGAAACATCAAAGGTACCGCCGCCTAAATCAAAAATCAGAACGTTCCT 2261 Query 86085 ACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGG 86144 || |||| ||| ||| || ||| ||||| || | ||||||||||| || Sbjct 2262 CTCACCTTTTAAATT---TTTATC------TAAGCCGTAAGCCAATGCTGCTGCAGTAGG 2312 Query 86145 TTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTG 86204 ||| || || ||| |||||||| || || ||||| | ||| ||| |||||||| Sbjct 2313 TTCGTTTATGATTCGAAGAACATTTAGTCCGGCAATAGTCCCAGCATCTTTTGTTGCTTG 2372 Query 86205 TCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTA 86250 || || | ||| ||||| || || || || || ||||| || ||| Sbjct 2373 TCGTTGAGAGTCGTTAAAGTAGGCAGGAACTGTGATAACCGCCTTA 2418 >seq18205 Length=6455 Score = 325 bits (360), Expect = 3e-83 Identities = 968/1472 (66%), Gaps = 31/1472 (2%) Strand=Plus/Plus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 |||| || || |||||||| || ||||| | ||| || ||||| || || | || || Sbjct 3994 GCAGAAACGTTTAGAATACCGTTCGCATCGAGATCGAACGTGACGTCGATCTTGGGCACA 4053 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | |||| |||||||| || | | ||| || || | || || ||||| Sbjct 4054 CCGCGAGGAGCGGGTGGGATACCGGTGAGGTCAAAACGGCCGAGCATGTTGTTGTCTTTG 4113 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | | ||| || |||||| | | ||||| || ||| | | || || || ||| || Sbjct 4114 GTCATTGCTCGCTCGCCCTCGTACACCTGGATGGTGACTGCGGGCTGGTTGTCCGAAAAA 4173 Query 281606 GTTGTAAATACTCTGG-ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || |||||| ||||| ||| | ||||| ||| | | ||| || ||||| || || || Sbjct 4174 GTCGTAAATG-TCTGGGATTGCGTGCAAGGTATTTTGGCGTTCCTTTCAATGATCTTCGT 4232 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | ||| ||||| || || | || ||||| | || | |||||| ||||| | | Sbjct 4233 CATGACACCTCCAGCCGTCTCGATGCCGAGAGACAACGGCGCGACATCCACTAGTAATAC 4292 Query 281725 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATA 281784 || ||||| ||| || || ||| | ||||| || || | ||||| || || Sbjct 4293 ATCTTGAATTTTGCTATGTTGTTCGCCACTTAATATAGCAGCCTGTACCGCAGCCCCGTA 4352 Query 281785 TGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGA 281844 || || || || || ||||| | | || ||||| |||||| || || ||| Sbjct 4353 AGCCACCGCCTCGTCTGGATTGATGGAGAGGTTCAGTTTCTTACCACAAAAGAAGTTTTG 4412 Query 281845 AAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCAC 281904 || | | | || ||| ||||| |||| || ||||| || | ||||| || || | Sbjct 4413 TAGCATGTTTTGTATCTTGGGAATTCGAGTAGAACCTCCGACGAGTACAACATCGTGGAT 4472 Query 281905 CTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTC 281963 | | | || |||| |||| |||| |||| |||| || || || |||||| | | | Sbjct 4473 G-GCGCTCTTGTCCATCTTTGCATCCTTTAAAGCTTTCTCCACTGGCTCAAGAGTACCAC 4531 Query 281964 TAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TC 282021 |||| || ||| | |||||| || |||||| | || | | | || || || Sbjct 4532 GGAACAGATCGGAATTTAATTCTTCAAACCGAGCTCTCGAAACTTT--CGTGTAGAAGTC 4589 Query 282022 AATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 282081 |||||||||| ||| | || | || ||||| | || || || || | || || Sbjct 4590 AATTCCTTCGTACAGCGCGTCTATCTCTATCGTTGCTTCCGTGCTCGATGACAATGTGCG 4649 Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAATC 282141 ||| || ||||| || || | ||| | |||| ||| | | | | || Sbjct 4650 TTTTGCTCGTTCGGCAGCAGTACGTAGCCGACGTAGAGCTCTGGAGTTACCACGTATGTC 4709 Query 282142 TGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATC 282201 | | |||||||| | ||| || || ||| | | | | ||||| | ||||| || || Sbjct 4710 TTTCTTATATTTGCGCTTAAATTCATCAGCCAAGTAATTGACAAGTCTGTTATCGAAGTC 4769 Query 282202 TTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG---TCCATCTTC 282258 ||| ||||| | | || | || | || ||| | |||| || | ||| || || Sbjct 4770 TTCGCCTCCGAGATGCGTGTCGCCGGCAGTCGCTTTCACTTCAAATAACGATCCCTCATC 4829 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | | || || || ||| || || || || | |||||| || | ||| | | Sbjct 4830 GATGGTAAGAATAGAGACGTCAAATGTGCCCCCGCCGAGATCAAATATTA--ACA--CGT 4885 Query 282319 TTCTTTGTCTT----GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCAT 282374 ||| || || | |||||||||||||||| || || | || ||||| || ||||| | Sbjct 4886 TTCGTTCTCCTTTAAGGTTTTTATCAAGACCGTAGGCCAGTGCGGCAGCTGTGGGTTCGT 4945 Query 282375 TAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTT 282434 | ||||||| ||| || || || || || || ||| ||||||||||| || || | || Sbjct 4946 TGATAATTCGCAAGACGTTGAGGCCTGCGATAGCTCCCGCATCTTTAGTAGCCTGGCGTT 5005 Query 282435 GTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATAT 282494 | || ||||| || || || || ||||| || || ||||| || | |||| | || Sbjct 5006 GAGAGTCGTTGAAGTAAGCGGGTACAGTGATGACTGCATCACGCACCTGCGTTCCCAGAT 5065 Query 282495 AAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCAT--TGATGAAATTTGTTCTGGAGA 282552 |||| ||| ||| ||||| || | | || ||| || ||| ||| ||| || | Sbjct 5066 AAGCCTCCGCTATTTCCTTCATCTTTGTAAGAACCATACTGCTGA--TTTCTTCGGGGGC 5123 Query 282553 ATATTGCTTGGATTCAT-TTTGATATGATACTTCAAAATATGGTTTATTACCAA--CATT 282609 ||| || | || ||| | || | |||| | | ||||| | | | |||| Sbjct 5124 GAATTTTTTCGCCTCTCCTTTAAAATCA-ACTTGGATCTTAGGTTT--TCCGTATTCATT 5180 Query 282610 AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTC 282668 |||||||| || ||||| | || ||| || ||||| ||| | ||| | ||| | | Sbjct 5181 GATAACTTTGAAGGGCCAGTGTTGCATGTCCTGTTGAAT-CTTGGAGTCGTCAAACTTGC 5239 Query 282669 TACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATT 282728 || || ||||| ||||||||||| | || ||||| ||||| | ||| | || | | Sbjct 5240 GGCCGATCAATCGCTTTGCATCAAACACCGTGTTGGTAGGATTGAGAGCAACCTGGTTCT 5299 Query 282729 TGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGC 282788 |||||||||| || || || | ||||| || || || | |||||||| || || |||| Sbjct 5300 TGGCTGCATCGCCGATAAGCCGCTCTGTGTCCGTGAACGCGACATATGAAGGGGTAGTGC 5359 Query 282789 GATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAAC 282848 |||| || || || || ||||| || || || || |||| ||||||||| || ||||| Sbjct 5360 GATTGCCCTGGTCGTTAGCAATGATCTCCACGTTTCCATGTTGCCATACCCCAACACACG 5419 Query 282849 TAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | || || || |||||||| ||||| ||| Sbjct 5420 AGTATGTGGTGCCCAAATCAATTCCAATCGCA 5451 >seq8267 Length=11458 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/129 (77%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 131180 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 131239 ||||| || | |||||||| ||||||||| ||||||| ||||||||| ||||||||||| Sbjct 8194 GTAGCAACTGTTGCATTTGGCATGGGTATTGATAAACCTGATGTTAGATTTGTTATTCAT 8253 Query 131240 TACGGAGC-TC-CCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTG 131297 || | | || ||| ||| ||| || || ||||||| ||| ||||| || || | Sbjct 8254 CAC--ACCATCAGCAAATCTATAGAAAACTACTACCAAGAAAGTGGCAGAGCTGGCCGAG 8311 Query 131298 ATGGAGAAA 131306 ||||| ||| Sbjct 8312 ATGGACAAA 8320 >seq2102 Length=18217 Score = 87.8 bits (96), Expect = 1e-11 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 432287 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACG 432346 |||||||||||| | || ||||||||| | ||||||||||| || || | ||||| | Sbjct 16911 AGGTAAAGAAGGGAGGATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTTTCTGCCAG 16852 Query 432347 TACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTAT 432406 || || || ||| ||||||||||| | | | || |||| || || |||| | ||| Sbjct 16851 AACCGTAATCACTCCTGATCCTAATTTACGTATTGATCAAGTAGGAGTGCCTCGCTCTAT 16792 Query 432407 TGCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGA 432454 ||| ||||| | || || ||| | |||||| | |||||| || Sbjct 16791 TGCCCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAATATAGA 16744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739023838987398