Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_024391.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq18169 134 4e-27 >seq18169 Length=2751 Score = 134 bits (148), Expect = 4e-27 Identities = 222/316 (70%), Gaps = 11/316 (3%) Strand=Plus/Plus Query 30498 GAATATCGATTCGAACCAAAAGAACAAGAACCGGAATTCATCACAGATTTATCGCCATAT 30557 |||||||| || |||||| | ||||||| |||| | ||||| ||| |||| | Sbjct 2438 GAATATCGCTTTGAACCAGATAAACAAGAGTTCTTATTCGTAACAGAATTAGCGCCTTTA 2497 Query 30558 ACTAACGCAGTAATGCAATCATTTTGGGTAGACCCTAGAACAAAAATTATTTATATGACA 30617 || |||||||| ||||| ||||||||| | || | ||| | ||| | ||||||||| Sbjct 2498 ACAAACGCAGTTATGCAGTCATTTTGGTTTGATAATCGAAAAGGTATTGTCTATATGACA 2557 Query 30618 CAAGCGCGTCCAGGCAATCATTACATGTTATCTAGATTGAAACCTAACGGACAATTTATT 30677 ||||| | ||| || || ||| | | ||||| ||| ||||| |||| ||| Sbjct 2558 CAAGC---TAGAGGTAACGGATATATGCTCACAAGATTACGACCAAACGGGCAATATATA 2614 Query 30678 GATAGATTGCTTGTTAAAAATGGCGGTCACGGTACACACAATGCGTATAGATACATTAAT 30737 ||||| | ||||||| ||| ||||||||||||||||||| || | || || || Sbjct 2615 GATAGTTCACTTGTTATTGGTGGTGGTCACGGTACACACAATGGTTACCGTTATATAGAT 2674 Query 30738 GGAGAATTATGGATTTATTCAGCTGT----ATTGGACAGTAACAAAAACAACAAGTTTGT 30793 | ||| | ||||| |||||| | | | ||| || |||| ||||| ||| || || Sbjct 2675 GATGAACTTTGGATATATTCATTTATTAAAAATGG-CAATAACCAAAAC-ACA--TTAGT 2730 Query 30794 ACGTTTCCAATATAGA 30809 || ||| |||||||| Sbjct 2731 TCGGTTCAAATATAGA 2746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134037494708978