Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hecale_20felix_20[genbank_20GCA_5F001486065.1_202015- 12-16] 32,723 sequences; 78,530,580 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2102 122 2e-22 >seq2102 Length=18217 Score = 122 bits (134), Expect = 2e-22 Identities = 349/520 (67%), Gaps = 34/520 (7%) Strand=Plus/Minus Query 304982 CGCATTAAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 ||| | ||||||||||| || | || |||| ||||| |||||||| || ||||| ||| Sbjct 16919 CGCTTAAAAGGTAAAGAAGGGAGGATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTT 16860 Query 305042 AGTGCAAGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCC 305100 ||| |||| |||||||| |||||| || || ||| || || || || ||||||| || Sbjct 16859 TCTGCCAGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCC 16801 Query 305101 AATTGAAATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAAC 305159 ||||| ||| ||||||| ||||| ||| | || | || ||| | | Sbjct 16800 TCGCTCTATTGCCCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACC 16742 Query 305160 ATTTG-AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTAT 305217 || || |||| |||| || |||||| ||| ||||||||||||| ||| Sbjct 16741 GAATGCAGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TAT 16689 Query 305218 AAAACACAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGT 305275 | | | || || | ||| | ||| | ||| | || || ||| | || ||| Sbjct 16688 ATAGTCCGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG- 16634 Query 305276 AAAATGCTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATT 305327 || ||| | ||| |||| |||| | | || |||| ||| |||||| Sbjct 16633 ---AT--TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACGATGATT 16580 Query 305328 GGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCA 305387 |||| | |||||| | || ||| | |||| |||||| |||||||| ||| | || | Sbjct 16579 TGGTTATTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGA 16520 Query 305388 AAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGG 305447 ||||||| | | | |||||||| | ||| | ||| | |||| || ||||| | Sbjct 16519 AAGTATTGCCGTGGTCTACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTG 16460 Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 ||||||| || || ||||||||| | |||||||||||||| Sbjct 16459 ATTTTGACGGCGACGAAATGAATTTACATGTACCTCAATC 16420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186315212785803